Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04383 ATGTCTTCGAAACAAAATGACACGAATGTTTACTTTAATACATGCATAGACCTGCCACCGCGGGTGAATTCCGAGGTACCATGGTGGAAAATTACAAATTCAAACACGAGTTTAGCAAATCCTTTGCCAGTGTTGCAGATGTTGCAGATGCAAATGTGTTTGATCTTTTTCGCAACTCTTTTGTTAAAATCGATCCTGTCTCGTTTTGGAATCCACAGGTTCACTTCTATGAGCATTGTTGGTCTTATCTTCGCAGCAACATTCGATAAAGAGTGGACGAAAACGATGAAGACAATGTTCTTCTTTGATTCACAGGAAAATCTAGGACTAATTTCAATATTTGGTTACATGATGTTCCTGTTTTACATTGGAGTAAAAACAGATATGAGTGTAGTCCATAAAACTAGGAGTGGTACCACCAACCTTGGTGCTTTAGCTATAATGGCTCCTTTTCTATGTGGCATGGCTACTCTAAGTTTTTTCTCATCAAAACACCTTCAATCTGACGAAACAAAAATACTTGGAGTTGTCATTGGATTGTTCTCTATGACCCCTTTCCCTGTAATCTCCTCAACTTTGAGTGATCTCAAGATCCTGAACTCTGAATTGGGTCGAATCGGGCAATCAGCGTCATTAGTCAGTGAAGTTTTCAGCGTGTTCATAGTATCAACACTAACATTTGGTAAATTATACGAAAATTATGGTTTAGCGAGAGCGTTGATTTGCGCTGTGGCTGCTATCTTGTTTATACTCTTGGTTATATTCATTATCCGACCGTCCATGTTTTGGATTATAAAACAGACACCAGAAGGTTATCATGTGAGTGATAACTATGTTTATAGCGTACTCATATTAGCCTTGTTATCATCCTATGCTTCATCTAGATTTGGATTTTTCTCACTCTTTGGACCTTTTGTATTGGGAATGGCTATTCCTGAAGGACCTCCGTTAGGCACTGCTATTATTAAGAAAATTGATACTTTTGTTAATGGGATTTTCATGCCAACGTTTGTGACAACATGTGCAATGAGGGTAGATTTTAAAGACTTGTTGTGTTGGACAAATAAAGTTGATGGAAGTGTTGATTATTTTATGGTGCAAGCTTTGGTTATTGTTACGGTTTGTTTTGTTTCTAAATTTGTTGCTTGTATGATACCTCCTTTACGCAGCGAAATGCCAGTGAGTCATGCTGTTTCTTTATCTTTGATTATGAATAGCAAAGGCATTGTTGAAATGGCTGCACTCTCTGTGGTCAGAGATACTACAGAGCTACCTAATAACATATTTTCCTTATTAATGGTATGCATCATAGTAAACACCAGTATGATTCCAATACTGTTGGGTTATATGTATGATCCAACAAAGAAGTACACAGGTTACACAAAGAGAAACATAGCAGATATGAAAAGTAACTCAGAACTTAGAGTTTTAGCATGTATTCACAGGCCCGACAACATTCCAGCGACGATAAATCTTCTTGAAGCATCATATCCAACAAAAGAAGGACCGATATGCACATACGCACTTCAACTGATTGAATTAATAGGAAGAGCTTCTCCTATATTCATCAGCCACGAACTTCAAAAAAAGAAGAAATCAAACACAAACACGTCGATGGCAGAGAAGCTTCTAGAATCATTTCAAATATTCGAAAATGAGTTCAAAGGTTGTTTAGTCGTCAACACATTCACAGCCATATCACCAGCCGAAATGATGTATGATGATATCTGTACATTAGCACTCGACAAATTTACATCACTTATCATTCTTCCTTTCCATAGAAAATGGTCGTGCGACGGTAACTCCGTGGAGTTGGAAGACGAGTCGTTGAGGGACTTGAACTTCCGAGTTATGGAAAGAGCACCGTGTGGGAAAGATGATAGAGAAGCACTTATTTTCACAAAGAGAATGACTAAGAATCCACATGTTAAGCTAACAGTGGTTAGATTCATGAGTTTGGAAGCTGGTTCAAAGAGTTGGGAGGGTTTACTTGATAATGAGTTGCTGGATGAAATAAAAACAAACAATAAAGTTGGTGATGCTTATGTAAAATATGTTGAGGAAACAGTCAAAGATGGACCTGAAACAATATTGATAATTCGGTCTTTGGTAACTGAATTTGATTTGATTGTTGTTGGGAGACAAGCTGGGATTGAAACACCTCAAACTTGTGGATTGTTGCAATGGAGTGAGTATCCTGAACTTGGTGTTTTAGGAGATTTGTTGGCTTCTACTGATGCTGCTGGTAAAGCATCTGTCTTTATTATACAACAACAAAGAACAGCTATGGATACTTAA 2298 0.3768 MSSKQNDTNVYFNTCIDLPPRVNSEVPWWKITNSNTSLANPLPVLQMLQMQMCLIFFATLLLKSILSRFGIHRFTSMSIVGLIFAATFDKEWTKTMKTMFFFDSQENLGLISIFGYMMFLFYIGVKTDMSVVHKTRSGTTNLGALAIMAPFLCGMATLSFFSSKHLQSDETKILGVVIGLFSMTPFPVISSTLSDLKILNSELGRIGQSASLVSEVFSVFIVSTLTFGKLYENYGLARALICAVAAILFILLVIFIIRPSMFWIIKQTPEGYHVSDNYVYSVLILALLSSYASSRFGFFSLFGPFVLGMAIPEGPPLGTAIIKKIDTFVNGIFMPTFVTTCAMRVDFKDLLCWTNKVDGSVDYFMVQALVIVTVCFVSKFVACMIPPLRSEMPVSHAVSLSLIMNSKGIVEMAALSVVRDTTELPNNIFSLLMVCIIVNTSMIPILLGYMYDPTKKYTGYTKRNIADMKSNSELRVLACIHRPDNIPATINLLEASYPTKEGPICTYALQLIELIGRASPIFISHELQKKKKSNTNTSMAEKLLESFQIFENEFKGCLVVNTFTAISPAEMMYDDICTLALDKFTSLIILPFHRKWSCDGNSVELEDESLRDLNFRVMERAPCGKDDREALIFTKRMTKNPHVKLTVVRFMSLEAGSKSWEGLLDNELLDEIKTNNKVGDAYVKYVEETVKDGPETILIIRSLVTEFDLIVVGRQAGIETPQTCGLLQWSEYPELGVLGDLLASTDAAGKASVFIIQQQRTAMDT 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04383 765 Pfam Sodium/hydrogen exchanger family 53 445 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa1g04383 765 Gene3D - 46 458 IPR038770 -
Vifa1g04383 765 PANTHER CATION/H + ANTIPORTER 39 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04383 Vifa-Chr1 681907100 681909771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04383 15 760 Antiporter Super Family AT5G22900 34.066 1.03e-153 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04383 K26731 - gmx:100785558 989.564