Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04369 ATGGCTTCCACCCAATCCTCCTTCGCGGGAACCATTCCGGCTCCGAAGGTTAGGGTAGTTGCAAAAATTCGTGGGTTTTCGGATCCAGATACCAATTTCGAACCCTCCAGAACTGTCGACTGGGTTTCGGTGACCACAGAAATTTCCGGGGACGTTACCATCTCCTTTAAAGAACAATCTTCTAGTCGGTATTCAGTTGACTATTGCTACAACGAACATGAAGATAATGAGGTAATCTATTCAAAGGAGGTGAAACCTCTTGTTTCGGCTGCTTTTGAAGGTATTAATAGCACAGTTATTGTTCATGGAGCTAGAGGCAGTGGCAAAACTCAATTAATTCAGGGCTCTTTGGAGAAATCGGGTTTGGCAATGCTGGCTATTTCGGAGTTTCTCTCGGTGACTGAGAAAAATGGAAAATCTATAGCAGTTTCTTTCTATGAGGTTGATCATCAAGACCATGCTACTGATTTATTAAACCCAGAACAATCACCAATTTTGGTGCTTGAAGATCACGGGAGAATTCTGTTTAAAGGGCTTACTCAAACTCCTGTGAAATCCATTGCTGAGTTTCAGAATTTATACATCACAGCATGTTCTGCACACACGGCTGCAACGGCTGCAACCAAAAAAGGATTTGAGCCTGCACCCAAAAAAGGATTTGAGCCTGCTCGGAGAAGCCACTTGGGATTAATTGTTCATGTCTTTGAACATAATAAAAGTGTAAATGGTCTTGTGAGCAAAATGAATTTTGTTGATATGGCAGGTTATGAAGATGCTAGAAAGAAAAGTGGCGATGCTTCTGGTGTTGCTGAGAATAACAAAATTAACAAGTCAATTTACGCCTTACTGAATGTTTGTTATGCTTTGAGCGCAAATGAAAGTCGTGTCCCCTTTCGGGAAAGTAAACTCACACGCATGTTGCAGGACTCCTTGAGGGGAACTAGCAAAGTTTTGTTGGTTTCGTGCTTGAACCCATCATTTTGCCAAGACACCGTTTACATGCTTACCTTAGCATCACGGTCATGTCAAAGGTCTCATCGGACGCCCTTTGGTTCCACGATGAAAAGTGCTAGTTCAACCAGACAGTCAGTGAACTTAGATTCCACAAAGAAAATTGCAAGTTCAGCAAGACAAACAGTTACCTTAGATTCCTCAAAGAAAAGTGCAAGCTCAGTAAGACAGATAGTTACCTTAGATTCTACAAAGAAAAATGTGAGTTTAGTAAGACAGACAGTAACCTTAGATTCTATAAGGAAAAGTGCAAGTTCTGTAAGACAGACAAAAACCTTAGATTCAATAAGGAAAAGTGAAAACTCAGTAAGGCAGACAAAAACCTTAGATTCCACAGAGAAAAGTGCAAGTTCAGTAAGGCAGACAAAAACCTTAGATTCAACAAGGAAAAGTGAAAATTCAGTAAGGAAGACAACAACCTTAGATTCAACAAGGAAAAGTGAAAATTCAGAGACAAAAACCTCAGTTTCCGCGAAGGAAAGTGCAAGTTCAGCAATGCAGTTCGTGACTATTCGTAAAAACAAGATACCCAAAAGTGTTTCTGCATCAACAAAGGAATTACCAGGTTCCATATCTCAGATATATGATGAAGAAACATGTGTTGTTGCTATGAAGTCTGAAATACAAGGAAGGAAATTGTTTGATGAAGTCAGTCACTCTGCTGCTAAAGCTGAGAAGGTTGACTCATCTTTGAACGCTAGCAGTGAAGTGGAACTTGATCCCATAGTGGAAAAGGGTACTTCTTTTGAGGATAAAGAGGAGATGCATTATCTCATTAATTACTCCAAAGATTTGTCAATAGCTAACGAAGGTGAAAACATGAACAAGGAGAACAACAACTTAATGGAAAATGAAGATTTTTCACCACCCATTAGTTCTCAATTGCGTGAACTTCAATCTCTCGTTTCATCAACTCCATTATGCATGCAGTTACTAGAGGAGAAATTCATTTCACCGGATGATAATCAGATTTCTACTAAAACTGCAGAACTAAGAACTTCTGATACTGAAAACCTAGATGTAATGAATAATAAAAGTTTTTGGGAAACATTCAACCTGCATGGTTATGGAATGAAGAATTCTACTGAAGTTACAGAACCAAGAACTCTTGATATTGAAATACCAGATGTAATGAATGGCAAAAGTCCTTGGGAAACATTCAACACGCATGGTTCTGGAATGAAGAATTCTACTGAAGTTACAGAAGAACCAAGAACTCCTGATATTGACATAAGAACTTCTGATATTGACATATCAGATGTAATGAATACCAAAAGTCATTGGGAAACATTTAACTTGCATGGTTCTGGAATGAAGAATTCTACTGAAATTACAGAACCAAGAACTCCTGATATTGACATACGAGATGTAATGAATACCAAAAGTCCTTGGGAAACATTTAACTTGCATGGTTCTGGAATGAAGAATTCTCTTGTTAAAGACTACCTTAGAATTTTAAACACAGCGGAAAAGGATGAACTGAAGAAGTTAAAGGGAATTGGAGAGAAAAGAGCAAACTATATACTCGAGCTTCGTGAAGAATCTCCGGAACCTTTCAAGAGTCTTGATGATTTGAAGGATATTGGACTTTCTGAAAAACAGATTAAGGGAATGATGAAGAAGGAAGTTGGAGAGCTTTTCAATTAG 2658 0.386 MASTQSSFAGTIPAPKVRVVAKIRGFSDPDTNFEPSRTVDWVSVTTEISGDVTISFKEQSSSRYSVDYCYNEHEDNEVIYSKEVKPLVSAAFEGINSTVIVHGARGSGKTQLIQGSLEKSGLAMLAISEFLSVTEKNGKSIAVSFYEVDHQDHATDLLNPEQSPILVLEDHGRILFKGLTQTPVKSIAEFQNLYITACSAHTAATAATKKGFEPAPKKGFEPARRSHLGLIVHVFEHNKSVNGLVSKMNFVDMAGYEDARKKSGDASGVAENNKINKSIYALLNVCYALSANESRVPFRESKLTRMLQDSLRGTSKVLLVSCLNPSFCQDTVYMLTLASRSCQRSHRTPFGSTMKSASSTRQSVNLDSTKKIASSARQTVTLDSSKKSASSVRQIVTLDSTKKNVSLVRQTVTLDSIRKSASSVRQTKTLDSIRKSENSVRQTKTLDSTEKSASSVRQTKTLDSTRKSENSVRKTTTLDSTRKSENSETKTSVSAKESASSAMQFVTIRKNKIPKSVSASTKELPGSISQIYDEETCVVAMKSEIQGRKLFDEVSHSAAKAEKVDSSLNASSEVELDPIVEKGTSFEDKEEMHYLINYSKDLSIANEGENMNKENNNLMENEDFSPPISSQLRELQSLVSSTPLCMQLLEEKFISPDDNQISTKTAELRTSDTENLDVMNNKSFWETFNLHGYGMKNSTEVTEPRTLDIEIPDVMNGKSPWETFNTHGSGMKNSTEVTEEPRTPDIDIRTSDIDISDVMNTKSHWETFNLHGSGMKNSTEITEPRTPDIDIRDVMNTKSPWETFNLHGSGMKNSLVKDYLRILNTAEKDELKKLKGIGEKRANYILELREESPEPFKSLDDLKDIGLSEKQIKGMMKKEVGELFN 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04369 885 Gene3D Kinesin motor domain 10 343 IPR036961 -
Vifa1g04369 885 SUPERFAMILY RuvA domain 2-like 820 878 IPR010994 -
Vifa1g04369 885 PANTHER KINESIN-RELATED 56 616 IPR027640 GO:0003777|GO:0007018
Vifa1g04369 885 MobiDBLite consensus disorder prediction 462 490 - -
Vifa1g04369 885 Gene3D - 811 883 - -
Vifa1g04369 885 PRINTS Kinesin heavy chain signature 247 265 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa1g04369 885 PRINTS Kinesin heavy chain signature 94 115 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa1g04369 885 PRINTS Kinesin heavy chain signature 296 317 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa1g04369 885 ProSiteProfiles Kinesin motor domain profile. 16 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa1g04369 885 MobiDBLite consensus disorder prediction 434 496 - -
Vifa1g04369 885 FunFam Kinesin-like protein KIN-10C 809 883 - -
Vifa1g04369 885 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 341 IPR027417 -
Vifa1g04369 885 Pfam Helix-hairpin-helix motif 823 871 - -
Vifa1g04369 885 SMART kinesin_4 14 349 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa1g04369 885 MobiDBLite consensus disorder prediction 442 461 - -
Vifa1g04369 885 Pfam Kinesin motor domain 42 340 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04369 Vifa-Chr1 679163177 679173686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04369 16 340 Calmodulin-binding Proteins AT5G65930 27.434 7.34e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04369 K10403 - gmx:100809612 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04369 1 679163177 679173686 Vifa1g04369 1 679163177 679173686 ECH