Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04223 ATGAAGTTTCTCAAAGGATTCAGTGGAGATGCCAAGGTGATGTATGAACAGGCAAGTCAAGTGGCAAATGACGCTGTTAGTAGCATCCGAACTGTTGCATCATTTTGCGCAGAATCAAAGGTTATGGATATGTATCGAAAGAAATGTTCAGGGCCAGAAAAACAAGGTGTTCGTTCGGGGCTTGTAAGTGGCGCAGGATTCAGCTTCTCTTTTGTGGCTCTATATTGCATGACTGCTTTTTGCTTCTACATAGGAGCTGTTCTAGTGCAGCATGATAAAGCCACTTTTCAAGAGGTTTTCAAGGTTTTCTTCAGTTTAACTATAACAGCAGTTGGCATTTCTCAGTCTAGTACTTTGGCACCAGACACTAATAAGGCGAAAGATTCTGCCGCTTCAATATTCAAAATTCTAGACAGTAAACCTACAATTGACTCTAGTAGCAATGCAGGCGAAACATCAGAAACAGTTACAGGTGATATGGAACTTCAACATGTCTGCGATTTGCAATTGCAGATTGTTAAAATTCCTCTTTGCAATAGTGCTATAGCACTACTATAA 558 0.4032 MKFLKGFSGDAKVMYEQASQVANDAVSSIRTVASFCAESKVMDMYRKKCSGPEKQGVRSGLVSGAGFSFSFVALYCMTAFCFYIGAVLVQHDKATFQEVFKVFFSLTITAVGISQSSTLAPDTNKAKDSAASIFKILDSKPTIDSSSNAGETSETVTGDMELQHVCDLQLQIVKIPLCNSAIALL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04223 185 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 125 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vifa1g04223 185 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 3 165 IPR039421 -
Vifa1g04223 185 Gene3D ABC transporter type 1, transmembrane domain 1 148 IPR036640 GO:0005524|GO:0016020
Vifa1g04223 185 Pfam ABC transporter transmembrane region 1 111 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vifa1g04223 185 SUPERFAMILY ABC transporter transmembrane region 1 141 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04223 Vifa-Chr1 652910639 652911381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04223 3 165 Calmodulin-binding Proteins AT2G36910 30.488 7.41e-27 104