Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04130 ATGGCCGCGTCTGCTACTACCGCTGCTTCTCATCTCCTTCGTCCTCTTTATCAAATTCAATTCCCGAAATGCCCTCACCTCTTTTCCGAATCCCAGTTTCGCCCTCGGCTACTCCGCTCTCAAACAACCCAAAGGCTCACCGTTCGCGCCACCGCCACTGTTGTCGTGGATTCGGATCTAAGTACGCATAAGGATCAGGAAAAGGAAACACAAGTGGACTTATTTGCGTGCCCAATATGCTATGAACCATTGATAAGAAAAGGTCCTGTTGGTCTTAATTTATCAGCAATCTATAGGTCTGGTTTCAAGTGTAAGAGATGTCAAAAATCATACTCTAGCAAAGACGGATATTTGGATCTGACACTGACTTCTGGACTGAAAGATTACACGGAAGTTCAACCAGTTCGGACAGAGCTTTTTAGGAGTCCCCTTGTTTCATTCTTATATGAGAGAGGTTGGCGTCAGAATTTCAGGCAAAGTGGCTTTCCTGGCCCTGATGAAGAGTTCAAAATGGCTCAAGAGTATTTTGAACCTGCTAAAGGTGGTCTGATTGTCGATGTTAGCTGTGGAAGTGGTCTATTTTCACGAAAGTTTGCCAAATGTGGAACCTATTCTGGAGTCATTGCACTAGACTTTTCCGAAAATATGCTTCGCCAATGCAACGATTTCATTAAGAAAGATGCAACACTCTCAGCAGCTAATATCGCCCTTGTAAGAGCAGATGTTTCCAGGCTTCCCTTTGCGTCAGGTTCCGTTGATGCTGTTCATGCTGGTGCAGCTTTGCATTGCTGGCCATCTCCCTCCAATGCTGTTGCTGAAATCACCCGTGTACTGAGAAGTGGTGGAGTATTTGTCGGAACCACTTTTCTTCGTTATACTTCATCAACTCCTTGGATTATACGCCCCTTCAGAGAGAGGAATTCTCAAGGCTATGGCTTCTTAATAGAAGAAGAGATCAAAGACCTTTGTACTTCATGTGGACTAACTAATTACTCATGCAAAATTCAGAAGTCTTTTATTATGTTTACGGCTCAGAAGCCTTAA 1044 0.4397 MAASATTAASHLLRPLYQIQFPKCPHLFSESQFRPRLLRSQTTQRLTVRATATVVVDSDLSTHKDQEKETQVDLFACPICYEPLIRKGPVGLNLSAIYRSGFKCKRCQKSYSSKDGYLDLTLTSGLKDYTEVQPVRTELFRSPLVSFLYERGWRQNFRQSGFPGPDEEFKMAQEYFEPAKGGLIVDVSCGSGLFSRKFAKCGTYSGVIALDFSENMLRQCNDFIKKDATLSAANIALVRADVSRLPFASGSVDAVHAGAALHCWPSPSNAVAEITRVLRSGGVFVGTTFLRYTSSTPWIIRPFRERNSQGYGFLIEEEIKDLCTSCGLTNYSCKIQKSFIMFTAQKP 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04130 347 CDD AdoMet_MTases 184 290 - -
Vifa1g04130 347 FunFam Putative methyltransferase, chloroplastic 140 346 - -
Vifa1g04130 347 Pfam Methyltransferase domain 185 285 IPR013216 GO:0008168
Vifa1g04130 347 PANTHER METHYLTRANSFERASE 94 334 - -
Vifa1g04130 347 Gene3D Vaccinia Virus protein VP39 140 345 IPR029063 -
Vifa1g04130 347 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 147 346 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04130 Vifa-Chr1 636664683 636667772 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vifa1g04130 Methyltransf_11 4.8e-21 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04130 - - gmx:100812067 543.502