Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04128 ATGGCTAATCAAACTACAACACTGCCACCAACCACCGATCCCTACCAATTCATCAATGGCCACCACAATCCCAACGATACACTCACTAGAAATCTTGAAGATCCACACACTTCACCTTCATCAGATCCCACTCTCCCAATCTCTGTTCTAACCAAAGATCTCACCATCAACATATCAAACCAAACATCTCTTAGATTATTCCTACCTAAAAAAGCAACTGTTTCTAAACAAAACAACAAACTCCTACCACTTATTGTTTTCTTCCATGGAAGTGGCTTCATCCTACTAAGTGCAGCCTCCACGATGTTCCATGATTTTTGTGTCCAAATGGCTGAAACTGTGGAGGCCGTTGTCGCATCGGTCGATTATCGCCTTGCACCGGAGCACCGTTTACCGGCGGCATACGATGATGCTATGGAGGCATTGAGTTTGATAAGATCCAGTGAAGATGAATGGTTGACCAAATATGTTGATTATTCTAAGTGTTTTCTAATGGGGAATAGTGCTGGAGCTACAATTGCATACCATGCAGGACTACGGGCGGTTGAAAATGTGAAAGATCTTGAGCCGTTGAAAATCCAAGGGTTGATTTTGCGTCAACCGTTTTTTGGTGGGACCCAGAGGACTGAGTCAGAGGTCAGATTAGAGAACAATCCTAATTTTCCATTGTGTGTTAGTGATTTGATGTGGGAATTAGCATTACCCATTGGAGTTGATCGTGATCATGAATATTCCAATCTAACGGCTGGGAATGGGGTTGATGAAAAATATGAGAAGATGAAGGATCAGGGGTTGAAGGTGTTGGTGAGTATGAACGGTGGAGATCCGTTGGTGGATCGTAATAAGGAGTTGGTGAAATTGTTGAAGGAGAAGGGTGTGGAAGTGGTGATGGATTATCAAGAAGATGGTTTTCATGGTGTTGCGTTTTCTGAGGCATCGAAGGCAAAGAATTTCATTGAATTGCTGAGTGGTTTCGTTTCCTCTTTTGCTTCTTAG 996 0.4287 MANQTTTLPPTTDPYQFINGHHNPNDTLTRNLEDPHTSPSSDPTLPISVLTKDLTINISNQTSLRLFLPKKATVSKQNNKLLPLIVFFHGSGFILLSAASTMFHDFCVQMAETVEAVVASVDYRLAPEHRLPAAYDDAMEALSLIRSSEDEWLTKYVDYSKCFLMGNSAGATIAYHAGLRAVENVKDLEPLKIQGLILRQPFFGGTQRTESEVRLENNPNFPLCVSDLMWELALPIGVDRDHEYSNLTAGNGVDEKYEKMKDQGLKVLVSMNGGDPLVDRNKELVKLLKEKGVEVVMDYQEDGFHGVAFSEASKAKNFIELLSGFVSSFAS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04128 331 MobiDBLite consensus disorder prediction 1 45 - -
Vifa1g04128 331 Gene3D alpha/beta hydrolase 15 329 IPR029058 -
Vifa1g04128 331 PANTHER ARYLACETAMIDE DEACETYLASE 44 307 - -
Vifa1g04128 331 Pfam alpha/beta hydrolase fold 85 308 IPR013094 GO:0016787
Vifa1g04128 331 SUPERFAMILY alpha/beta-Hydrolases 12 320 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04128 Vifa-Chr1 636312772 636313767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04128 32 295 Carbohydrate Esterase AT5G16080 37.681 9.56e-52 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04128 - - gmx:100795069 424.861