Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04119 ATGGGCAAGGAATGGAATTGGGTGGGAAAATCATCCAAAAGAAGTGTTAAAGTTGAAGAAAATCATGAAACAACACCTAGTGGATGCATGTGTGCTGTTTTTCAGTTCTTTGATTTTCATCATTTTTCTAACTCAATAAACCATCAACAACAAATCACTTTCAAATCACCTTCTTCAACTACTATAGTCCCAAAAGGTGGTGAAGCTCCTAGGAATAGCTTGGAATCTGAGGATAGCATTGTTTCAGGTTCTCTATCAAAAGAAGAAAAGTTTAAAGTTCCAAATATACAAATCAAAACTAAAAGGAGCAATGGTGGAAATTTGACTGATTTGTCCTCAGAAATCAGCACTTCATCATCACCAGGAACAAAGACACCAACTTTGGTAGCAAGATTAATGGGAACCAAACCAAGGAACAGCATTGATGGTAGTGAAATTACAAGAGTACCCTCATCTAGAAAATCAGATTTTGATCAACATAGACTATCTCTTCAAATCAACAAAGCCAATAGTTTTGGTGATGAGGATTTTGAGCTGCCTAGATTGTCATTTTCAAAGAGGAAAGTTGATGAGAATAGTTCTAAAAGTTCAAGTCACTATGCTAAGCAAATTGTGAAACAAGTTAAGGAAAGTGTTGTGAGTAGAAAAGTTGGTCAAGACATTACCAATAATCTCAAAAGCATGCAGGATATCAATATCAAACAAAACACTAGAGTAACCAAGAAGTTACCAAGCAGTGATCAATTACAAGGAAGAGAAGAATTCTTAGGACAGTTAAGAGTCAAGAAATGTCCCAAAGCATCATCATTGAAAGATCCAAACCCTAGTTCATCATCTTCACCAAAGATTAGATTCATTGAAAACAAACACAAGCCAAACACAACAACAAAAACAACATCAAAAAATCAAAACACAAAACCAAAGGCTTGTGCATTGAAACAAGAGCAAGAATCAAAGGACAAGAAACTAGTCTCATCAAATTGCAAGAAAGCTACAAATGAAAAGTTTAGTTCAAGATTCAAAAGGCCTCCACAAACATCAGATATAATCGCTCGGCCAACATCGAATTCTCGAGCAAATGACATCAAAAGTAATACCAAATGCAAGAAAACTCAACCATTGTCAAGCAATCTTGTCAACAACATCAATGCTCTTTCAAATGTTGACTCTGTTAAGACAGAGTCCTCTCCTCTGTCCAACAAAATTCCTCAGAATCAGGTATCTGAAACTCAAGACTGCAAACTCCAAAGGTACAAACCAGAATTTCAGTACATTGCAGAAATCATAAACAAACATGTCACAACAACAAAAACAATGTCTTTTCACAAATTGTTCTCTTCAACACACTCACTTGACCCATCAATCTTCAACCTTCTCGAACAAAATTCCGACGATAAAGATCAAAACTTTGGCACAAAAAACCAACTGGGTCAACGTTGGAATCGGAAATTGATGTTTGATTTGGTGGATGAAGTTCTAATGGAGATTTTGAAGCCTAAGAGTAGTGAAAAAAAGCTATGTTTTTTAGATGAGTTTTGTGAGAAGTGGACAGTTATGGAGTTAACAGAGAAAGTTTGGAAAAGGGTTAGGGGATTCCCATGTGCTAAGTGTGAAGTTTTGGATGATATTGATAATTTGATTGAATCAGAAGATATGGAGAAAGTGATCAAGTTTGAAGGTGAAGATGAAAGAGAAGAGTTGGTGAGAGAGATTGAAGGGAACATATTAAACACATTGGTGCATGAAACTATTTTGGTTATGAGTATGTTTGAATGA 1776 0.3564 MGKEWNWVGKSSKRSVKVEENHETTPSGCMCAVFQFFDFHHFSNSINHQQQITFKSPSSTTIVPKGGEAPRNSLESEDSIVSGSLSKEEKFKVPNIQIKTKRSNGGNLTDLSSEISTSSSPGTKTPTLVARLMGTKPRNSIDGSEITRVPSSRKSDFDQHRLSLQINKANSFGDEDFELPRLSFSKRKVDENSSKSSSHYAKQIVKQVKESVVSRKVGQDITNNLKSMQDINIKQNTRVTKKLPSSDQLQGREEFLGQLRVKKCPKASSLKDPNPSSSSSPKIRFIENKHKPNTTTKTTSKNQNTKPKACALKQEQESKDKKLVSSNCKKATNEKFSSRFKRPPQTSDIIARPTSNSRANDIKSNTKCKKTQPLSSNLVNNINALSNVDSVKTESSPLSNKIPQNQVSETQDCKLQRYKPEFQYIAEIINKHVTTTKTMSFHKLFSSTHSLDPSIFNLLEQNSDDKDQNFGTKNQLGQRWNRKLMFDLVDEVLMEILKPKSSEKKLCFLDEFCEKWTVMELTEKVWKRVRGFPCAKCEVLDDIDNLIESEDMEKVIKFEGEDEREELVREIEGNILNTLVHETILVMSMFE 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04119 591 MobiDBLite consensus disorder prediction 102 126 - -
Vifa1g04119 591 Pfam Domain of unknown function (DUF4378) 421 582 IPR025486 -
Vifa1g04119 591 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 144 588 - -
Vifa1g04119 591 Pfam DUF761-associated sequence motif 118 134 IPR032795 -
Vifa1g04119 591 MobiDBLite consensus disorder prediction 292 311 - -
Vifa1g04119 591 MobiDBLite consensus disorder prediction 257 369 - -
Vifa1g04119 591 MobiDBLite consensus disorder prediction 57 81 - -
Vifa1g04119 591 MobiDBLite consensus disorder prediction 102 154 - -
Vifa1g04119 591 MobiDBLite consensus disorder prediction 329 369 - -
Vifa1g04119 591 MobiDBLite consensus disorder prediction 312 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04119 Vifa-Chr1 634666041 634669275 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04119 95 583 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 28.547 1.01e-32 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04119 - - psat:127130446 951.429