Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04117 ATGGGCAAGGAATGGAATTGGGTGGGAAAATCATCCAAAAGAAGTGTTAAAGTTGAAGAAAATCATGAAACAACACCTAGTGGATGCATGTGTGCTGTTTTTCAGTTCTTTGATTTTCATCATTTTTCTAACTCAATAAACCATCAACAACAAATCACTTTCAAATCACCTTCTTCAACTACTATAGTCCCAAAAGTTTCAGGTGGTGAAGCTCCTAGGAATAGCTTGGAATCTGAGGATAGCATTGTTTCAGGTTCTCTATCAAAAGAAGAAAAGTTTAAAGTTCCAAATATACAAATCAAAACTAAAAGGAGCAATGGTGGAAATTTGACTGATTTGTCCTCAGAAATCAGCACTTCATCATCACCAGGAACAAAGACACCAACTTTGGTAGCAAGATTAATGGGAACCAAACCAAGGAACAGCATTGATGGTAGTGAAATTACAAGAGTACCCTCATCTAGAAAATCAGATTTTGATCAACATAGACTATCTCTTCAAATCAACAAAGCCAATAGTTTTGGTGATGAGGATTTTGAGCTGCCTAGATTGTCATTTTCAAAGAGGAAAGTTGATGAGAATAGTTCTAAAAGTTCAAGTCACTATGCTAAGCAAATTGTGAAACAAGTTAAGGAAAGTGTTGTGAGTAGAAAAGTTGGTCAAGACATTACCAATAATCTCAAAAGCATGCAGGATATCAATATCAAACAAAACACTAGAGTAACCAAGAAGTTACCAAGCAGTGATCAATTACAAGGAAGAGAAGAATTCTTAGGACAGTTAAGAGTCAAGAAATGTCCCAAAGCATCATCATTGAAAGATCCAAACCCTAGTTCATCATCTTCACCAAAGATTAGATTCATTGAAAACAAACACAAGCCAAACACAACAACAAAAACAACATCAAAAAATCAAAACACAAAACCAAAGGCTTGTGCATTGAAACAAGAGCAAGAATCAAAGGACAAGAAACTAGTCTCATCAAATTGCAAGAAAGCTACAAATGAAAAGTTTAGTTCAAGATTCAAAAGGCCTCCACAAACATCAGATATAATCGCTCGGCCAACATCGAATTCTCGAGCAAATGACATCAAAAGTAATACCAAATGCAAGAAAACTCAACCATTGTCAAGCAATCTTGTCAACAACATCAATGCTCTTTCAAATGTTGACTCTGTTAAGACAGAGTCCTCTCCTCTGTCCAACAAAATTCCTCAGAATCAGTCACAGGTATCTGAAACTCAAGACTGCAAACTCCAAAGGTACAAACCAGAATTTCAGTACATTGCAGAAATCATAAACAAACATGTCACAACAACAAAAACAATGTCTTTTCACAAATTGTTCTCTTCAACACACTCACTTGACCCATCAATCTTCAACCTTCTCGAACAAAATTCCGACGATAAAGATCAAAACTTTGGCACAAAAAACCAACTGGGTCAACGTTGGAATCGGAAATTGATGTTTGATTTGGTGGATGAAGTTCTAATGGAGATTTTGAAGCCTAAGAGTAGTGAAAAAAAGCTATGTTTTTTAGATGAGTTTTGTGAGAAGTGGACAGTTATGGAGTTAACAGAGAAAGTTTGGAAAAGGGTTAGGGGATTCCCATGTGCTAAGTGTGAAGTTTTGGATGATATTGATAATTTGATTGAATCAGAAGATATGGAGAAAGTGATCAAGTTTGAAGGTGAAGATGAAAGAGAAGAGTTGGTGAGAGAGATTGAAGGGAACATATTAAACACATTGGTGCATGAAACTATTTTGGTTATGAGTATGTTTGAATGA 1788 0.3568 MGKEWNWVGKSSKRSVKVEENHETTPSGCMCAVFQFFDFHHFSNSINHQQQITFKSPSSTTIVPKVSGGEAPRNSLESEDSIVSGSLSKEEKFKVPNIQIKTKRSNGGNLTDLSSEISTSSSPGTKTPTLVARLMGTKPRNSIDGSEITRVPSSRKSDFDQHRLSLQINKANSFGDEDFELPRLSFSKRKVDENSSKSSSHYAKQIVKQVKESVVSRKVGQDITNNLKSMQDINIKQNTRVTKKLPSSDQLQGREEFLGQLRVKKCPKASSLKDPNPSSSSSPKIRFIENKHKPNTTTKTTSKNQNTKPKACALKQEQESKDKKLVSSNCKKATNEKFSSRFKRPPQTSDIIARPTSNSRANDIKSNTKCKKTQPLSSNLVNNINALSNVDSVKTESSPLSNKIPQNQSQVSETQDCKLQRYKPEFQYIAEIINKHVTTTKTMSFHKLFSSTHSLDPSIFNLLEQNSDDKDQNFGTKNQLGQRWNRKLMFDLVDEVLMEILKPKSSEKKLCFLDEFCEKWTVMELTEKVWKRVRGFPCAKCEVLDDIDNLIESEDMEKVIKFEGEDEREELVREIEGNILNTLVHETILVMSMFE 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04117 595 Pfam DUF761-associated sequence motif 120 136 IPR032795 -
Vifa1g04117 595 MobiDBLite consensus disorder prediction 259 362 - -
Vifa1g04117 595 MobiDBLite consensus disorder prediction 393 412 - -
Vifa1g04117 595 MobiDBLite consensus disorder prediction 331 362 - -
Vifa1g04117 595 MobiDBLite consensus disorder prediction 294 313 - -
Vifa1g04117 595 Pfam Domain of unknown function (DUF4378) 425 586 IPR025486 -
Vifa1g04117 595 MobiDBLite consensus disorder prediction 64 83 - -
Vifa1g04117 595 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 146 592 - -
Vifa1g04117 595 MobiDBLite consensus disorder prediction 105 127 - -
Vifa1g04117 595 MobiDBLite consensus disorder prediction 314 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04117 Vifa-Chr1 634666041 634669275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04117 97 587 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 28.720 3.14e-33 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04117 - - psat:127130446 964.911