Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04084 ATGTCTAATCCAACTTTGCAACCACCATCAACAATAACCGATCCCTACCAATGGATCAAAATCCAACATAATCCCAACGATACACTCACTCGAAATCTTGAAGATCCACACACTTCACCTTCATCAGATCCCACTCTCCCAATCTCTGTTCTAACCAAAGATATCACCATCAATAATTCAAAGAAAACGTGGCTACGATTATTCCTACCTAAAAAAGCAACTGTTTCAAACCAAAACAACAAACTTCTACCACTCATTGTTTTCTTTCATGGAAGTGGCTTCATCGTAACAAGTGCAGCCTCCACTCGATTCCATGATTTTTGTGTCGAAATGGCTGAAACTGTGGAGGCTGTGGTCGCATCGGTAGATTATCGTCTTGCGCCGGAGCACCGGTTGCCAGCGGCATACGATGATGCTATGGAGGCACTGAGTTTGATAAGAACTAGTGAAGATGAATGGTTGACTAAATATGTTGACTATTCTAAGTGCTTTATAATGGGGAATAGCGCTGGAGCTACAATTGCATACCATGCAGGACTACGTGTGGTTGAAAATGTGAAAGATCTTGAACCGTTGAAAATTCAAGGGTTGATATTGCGTCAACCATTTTTTGGCGGGACCCAGAGGACTGAGTCTGAGGTGAGATTAGAGAATAATCCTCACTTTCCATTGTGTGTTAGTGATTTGTTATGGAAATTAGCATTACCAATTGGAGTTAACCGTGATCATGAGTATTCCAATATAACGGTTGGGAATGATGTTGGTGAAAAATTTGAGAAGATTAAGGATCAAGGGTGGAAGGTGCTGGTGAGTATGAACGGTGGGGATCCACTGGTGGATCGCAGTAAAGAATTGGTGAAATTGATGGAGGAAAAAGGTGTGGAAGTGGTGATGGATTTTCAAGAAGATGGTTTTCATGGTGTTGAGTTTTCTGAGGCATTGAAGGCAAAGAATTTCATCGAATTGGTGAATGGTTTCGTTTCCTCTTTCTCTTCTTAG 999 0.4144 MSNPTLQPPSTITDPYQWIKIQHNPNDTLTRNLEDPHTSPSSDPTLPISVLTKDITINNSKKTWLRLFLPKKATVSNQNNKLLPLIVFFHGSGFIVTSAASTRFHDFCVEMAETVEAVVASVDYRLAPEHRLPAAYDDAMEALSLIRTSEDEWLTKYVDYSKCFIMGNSAGATIAYHAGLRVVENVKDLEPLKIQGLILRQPFFGGTQRTESEVRLENNPHFPLCVSDLLWKLALPIGVNRDHEYSNITVGNDVGEKFEKIKDQGWKVLVSMNGGDPLVDRSKELVKLMEEKGVEVVMDFQEDGFHGVEFSEALKAKNFIELVNGFVSSFSS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04084 332 Pfam alpha/beta hydrolase fold 86 308 IPR013094 GO:0016787
Vifa1g04084 332 Gene3D alpha/beta hydrolase 16 330 IPR029058 -
Vifa1g04084 332 SUPERFAMILY alpha/beta-Hydrolases 18 314 IPR029058 -
Vifa1g04084 332 PANTHER ARYLACETAMIDE DEACETYLASE 45 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04084 Vifa-Chr1 628617275 628618273 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04084 33 296 Carbohydrate Esterase AT5G16080 37.729 3.45e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04084 - - gmx:100795069 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04084 1 628617275 628618273 Vifa3g03026 3 861456732 861457745 PCT
Vifa3g03018 3 860184745 860185722 Vifa1g04084 1 628617275 628618273 PCT