Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04083 ATGGAGAGTTCTAAGAACAATAAACTGGAGAAAAGAAGGTATGATGTCGTTAATGAGGAGCAACATCATCTTGGTAACTCAAAGAAGCCAAAACTACCTGGTTTAGCCAGTGTGATTGTGGAAGCTTTGAAGGTGGATAGTTTGCAAAGACTATGCTCATCTTTGGAACCTCTACTCAGAAAAATTGTCAGTGAGGAAGTGGAGCGGGCTTTGACGAAATTGGATTATGCTAAACTGGGTGATACGTCTTCACCGCCGGGGGAAAAGAATCTGCAGCTTCATTTCAGAACAAGAATGCCACCTCATTTGTTCACAGGAGGGAAGGTTGAGGGAGAGCAAGGAGCAGTCATCCATGTTATTTTGTTGGATCCGAAAACGGGCAACGTTGTTCAAGTTGGACCGGAATCAGTTTCTAAGTTGAATGTTGTAGTACTTGAAGGTGATTTTAATGAGGAAGTTGATGATGATTGGACAAAGGATCATTTTGAAAGTCATCAAGTAAAGGAACGTGATGGGAAAAGACCAATTCTAACCGGTGATTTGCAAGTTAGTCTAAAGGAAGGTGTAGGAACATTAGGCGATCTTTCTTTCACGGACAATTCTAGCTGGATAAGAAGCAGAAAATTTAGGCTTGGTGTTAAGGTGTCTCCTGGGTATTGTGACGGGATTCGAGTGCGTGAGGGTAAGACTGAAGCCTTTGCTGTTAAAGATCATAGAGGGGAATTGTACAAGAAACACTATCCACCTGCTTTGCATGATGAAGTTTGGAGATTGGATCGGATAGCGAAGGATGGTGCACTTCACAAAAAATTGATTCATTCAAGAATAGTAACAGTAGAAGATTTCCTGCGTCTTCTTGTCCGTGAGCCACAGAAATTAAGAAGTATACTCGGCAGTGGAATGTCCAACAGAATGTGGGAGAACACTGTGGAGCATGCCAAGACATGTGTCTTGGGTACTAAGCTTTTTGTTTATTACACTGATGAAACCAATAGCACTGGCGTTATGTTCAACAACATATATGAGCTAAGAGGCCTCATTGCTGATGGACACTTCTTCTCTTTAGAATCTCTCACTCCAAATCAGAAGATGTCTGTGGATTCCTTGGTGAAAAAAGCATATGATAATTGGGACCAAGTGATAGAATATGATGGAAAAGTTTTAAATTCTTTGACTAATTCCAAAAGGGGATCAAAATCTATAGATACTCATACAATGCATCACAACAATTTCCAAGACCAGCAGTACGCATCTGCAAAGGGAAGGGCGTTGTACGTCTCATCCGTACCAAATCAACATTTGCAAATAACGAACAACTACTCATCCAGTCCTGATTATCAGATGGTAGGGACATCTGTAAATGAGTCACAAATAGCATTACCAGGAACCATGAATTACAGCATGCCAGGTCATGAAAATGAAGGCGCTTATTATCATGGAGACTGGTCTAGGCAGAGAAATGGACAAGGGTTGGAAGACATTGTCGCGGAAGAGCTTCGTCTTAGGAGTTCACAGATGTTGGAGAGCGATGATATGCAGAGGTTACTTAAGACGATTAATGAAGGAGCTAGTTTTGGTCATTCTAACGAGAGTTGTTACAGTTACAGGCTTGAGTATGAGCCTCCGTTCAGCGGCGAGGATAATGTCAAGTGCTCGGGGAAGGCTGTTGTTGGGTGGCTTAAGCTCAAAGCAGCTTTAAGGTGGGGAATATTTATTAGAAAAAGAGCTGCAGAAAGACGAGCACAGCTTACTGAGTTGAATTGA 1764 0.4189 MESSKNNKLEKRRYDVVNEEQHHLGNSKKPKLPGLASVIVEALKVDSLQRLCSSLEPLLRKIVSEEVERALTKLDYAKLGDTSSPPGEKNLQLHFRTRMPPHLFTGGKVEGEQGAVIHVILLDPKTGNVVQVGPESVSKLNVVVLEGDFNEEVDDDWTKDHFESHQVKERDGKRPILTGDLQVSLKEGVGTLGDLSFTDNSSWIRSRKFRLGVKVSPGYCDGIRVREGKTEAFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLIHSRIVTVEDFLRLLVREPQKLRSILGSGMSNRMWENTVEHAKTCVLGTKLFVYYTDETNSTGVMFNNIYELRGLIADGHFFSLESLTPNQKMSVDSLVKKAYDNWDQVIEYDGKVLNSLTNSKRGSKSIDTHTMHHNNFQDQQYASAKGRALYVSSVPNQHLQITNNYSSSPDYQMVGTSVNESQIALPGTMNYSMPGHENEGAYYHGDWSRQRNGQGLEDIVAEELRLRSSQMLESDDMQRLLKTINEGASFGHSNESCYSYRLEYEPPFSGEDNVKCSGKAVVGWLKLKAALRWGIFIRKRAAERRAQLTELN 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04083 587 MobiDBLite consensus disorder prediction 1 29 - -
Vifa1g04083 587 Pfam Calmodulin binding protein C-terminal domain 321 383 IPR046829 -
Vifa1g04083 587 PANTHER OS02G0177800 PROTEIN 21 512 IPR012416 GO:0005516
Vifa1g04083 587 Pfam Calmodulin binding protein-like N-terminal domain 91 238 IPR046831 -
Vifa1g04083 587 MobiDBLite consensus disorder prediction 1 27 - -
Vifa1g04083 587 Pfam Calmodulin binding protein central domain 250 316 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04083 Vifa-Chr1 628561653 628564217 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04083 1 587 Calmodulin-binding Proteins AT2G24300 60.258 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04083 - - tpra:123882842 1050.81