Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04079 ATGATATTTCTAAAATCAACCATGGCCCTCTTTTGCTTATCAATATTCACATTTTCATTTTCCCTAACAATCTTCTTATTGTTAAACTCAACAACACCTCAAACACAATCTCCAACAAAACCATGCAACGATGATCCTTACAAACAACTTAACCTCGTCCTTAACCCAAACGGCACAATCATTCGACAAAACAAACCTACGACACCTCCTTCATTAGATCCTACTCTCCCCATTCTCTCCAAAGATCTCATGATCAACCAATCAAAAGCCACGTGGGCTCGGATCTACCTACCCCACAAAGCACTAGATCACACCTCCAACAAACTTCCCCTTATAATTTTCTTCCACGGTGGTGGATTCATTTTTCTCAGTGCAGCATCAACAATTTTTCATGAGTTTTGTTTCAACATGGCAAACAACGTTGTAGCGGTTGTCGTGTCGGTTGAGTATCGTCTCGCACCGGAACATAGACTCCCGGATGCATATGAAGATGCGGTGGAGGCGCTGCACTGGATCAAAACCAACCAATCAGATGATTGGTTAAGAAACCATGTTGATTATTCCAAAGTTTTTCTTATGGGGAGTAGTGCTGGTGGAAACATAGCATACAACGCGGGTCTAAGTGTAGCAACGGTAGAAGATGTAGAAGATGAAGTTTCTAAGATGATCAAAGGGCTGATATTGATTCAACCTTTTTTCAGTGGGACCCACAGAACACGTTCGGAAATTAAGCTTGCTAATGATCCTCATTTGTTATTGTGTAGTAATGATGCGTTGTGGGAATTATCGTTACCGGTTGGGGTTGATCGTGATCATGAGTATTGTAATCCAACGGTGAGAGATAATGTTGTGAGATTGAAAAGGGTTAGAGAGATTGGGTGGTGGGTGTTGGTGACCGATTGCGACGGTGATCCGCTTGTGGACCGTTCGATTGGGTTAGTGAGAGTGATGGAGGAAAATAGAGTGAATGTTGTGGGGCATTTTACAAAAGGAGGTTATCATGGTATTCAAGATAGTGAGCCTTTGAAAGCAAAGGAACTTTATGGGGTGATAAAAAAGTTTATTTTATCTTTGCCTAATCACAACATGGAATGA 1095 0.4146 MIFLKSTMALFCLSIFTFSFSLTIFLLLNSTTPQTQSPTKPCNDDPYKQLNLVLNPNGTIIRQNKPTTPPSLDPTLPILSKDLMINQSKATWARIYLPHKALDHTSNKLPLIIFFHGGGFIFLSAASTIFHEFCFNMANNVVAVVVSVEYRLAPEHRLPDAYEDAVEALHWIKTNQSDDWLRNHVDYSKVFLMGSSAGGNIAYNAGLSVATVEDVEDEVSKMIKGLILIQPFFSGTHRTRSEIKLANDPHLLLCSNDALWELSLPVGVDRDHEYCNPTVRDNVVRLKRVREIGWWVLVTDCDGDPLVDRSIGLVRVMEENRVNVVGHFTKGGYHGIQDSEPLKAKELYGVIKKFILSLPNHNME 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04079 364 Gene3D alpha/beta hydrolase 47 358 IPR029058 -
Vifa1g04079 364 SUPERFAMILY alpha/beta-Hydrolases 54 355 IPR029058 -
Vifa1g04079 364 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 112 128 IPR002168 GO:0016787
Vifa1g04079 364 Pfam alpha/beta hydrolase fold 112 336 IPR013094 GO:0016787
Vifa1g04079 364 PANTHER ARYLACETAMIDE DEACETYLASE 62 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04079 Vifa-Chr1 627919527 627920621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04079 70 277 Carbohydrate Esterase AT1G68620 42.991 3.32e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04079 - - psat:127103402 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03026 3 861456732 861457745 Vifa1g04079 1 627919527 627920621 PCT