Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04070 ATGGTTGGTGACAAAGGAGACACATCTAAAAAACAACAAACTTCGTCTTCTCCAAAACCACTTCATGAGGAATCATCACCCTCACAACAAGTTATTGTTGTTACTGGAACCAACCCTTTCATTTCAACTCCTCTTTATGTTTCAACTGGTGCAAGTTCTTCACCCTTTGAAAACCAATTTGAAACAACAACCTTAAACACAACAAAAAGACCAAGATATAGTGGACAATGGAAGCTTCTACCGTCACCAACATCACAACAAAAGCAACTTCAAACTCAACAACAACTCACCATTCTTAATCCAACAACAGACTCAAAATCAACAACCCCTTCACCATCAAATCCTCAACAACAACAACAACCTTTAGCTGCTTCTTCGTCAGACACAACATCTTCACAATCTGTTGATCATCTCTCACCAATGCCTGGTCAAGAATTAGGAAACAAACAAGAACTAGAACAGCAAGTTCATCAGCAGCTCCGAAAAGGTAAATATGTAAGTCCCGTTTGGAAACCAAATGAAATGCTATGGTTAGCAAGAGCATGGAAAGAACAATACCAAACAGCTTCAGATTCATCTCAACAACAACAACTACAACAAAACCAACAACAATCAGAGCTTGGAATGAGTAGAGGCAAAACAAGAGCTGACAAAGACAAAGAAGTTGCTGAATTTCTAAACAAACATGGTGTTAATAGAGACGCCAAAACCGCAGGTACTAAATGGGATAACATGCTAGGTGAATTTAGGAAAGTTTATGAATGGGAAAGAGGTGGTGAAAGAGAACAAGTTGGAAAAAGCTATTTTAGGCTTTCACCTTATGAAAGAAAGTTGCATAGGTTACCAGCCTCTTTTGATGAAGAAGTTTTTGAAGAACTTTCACAGTTCATGGGTTCAAGAATGAGGTCTTCTTCTCATGGTGGTAGAATTGGTTCTTCCTTTGTTTCTTGTGATGAAACTAGAACAAGATCTCTTCCTCCTCCAAGACCTTTCAAAGATGATGAACTTCCTCTATCAGCTAGGACAAAGCAATTGACAATGACAAGTAGTGGTGGTGGTGGTGGTGAACCATTTTTTCATAGAGGGAACATATTAGGGTTAGATTCAATGATTGAAATGTCGACGACACCTTGTTCGAATTCGAAAGAATTAAAAAGAATTGGGAAGATAAAAATGACATGGGAGGAATCAGTGAGTTTATGGGGTGAAGAAGGTGAAGTTCATAGGGGAAGAGTGAGGCTACAAAATTCAAGTTTTTTACATGCTGATGAAATCACTTGTTTTGATGATGCAATGGTGATTTGTCCTTTGGAATCTTTTGAAGATGGTCCTTTGAAAGGTTTTTCAGTTGATAGATTTGTTTCTGGACAACAAGTTAAAGTTTTTGGTAGAAGAAAATCTTCTTCAGCTTCTTCTAGTGGTTTTGCTGAAAGAGTTCAACAACCTATCAATAAACCAATTCCCATAAGATCAATTGTTCCATTGGATTTTAGAGATCCAACTGAATACTACATAGATCATCTTCTTCATATCTCATCACCACAATCACTTCCAACATTATTCGAACTCAAGCATTATCTTCAAGAACCTCCACCACCGAATCTTCGTTTTCCATTGCGAAAAGAAGTGTATGATGATTTACCACAAGGTAAAGAGTTTTTCTTCACAACAACCTCTGAACCATTGGATTGTAGATCCATAATCTATGATATTGTTGGCCCCATCATCCGAAACAACATCAACATCATTGCTAATAACAATAACAACCCTAGTTGTTGTACTCTTCCATTTTGTAGTAGAGAGTCTCTCATTGGTGTTTGGGATGATTGTATCAATAGGGTTGTTTCAAGATTCTGTTGCGAAGATATCGTAATTACTAGAAAGCCCTTTTCATCGTCTTCATTATCAAATTTACAATCACAAGACTTATTGTTGTTGTTGCAAGATGAATGGCCTAATGTGAGTGGTTTTGTGAACAATTTTTGCTTATGGAGAGGTGAAGAATGTGAAGATTTTAAGGAGAATAATCATCAACAAAATCCATCATCTACTATCATTCAAAAGTTACTATGGAGTTATTCTGATTTACCCTATATCCTTGGTTACTATGCAATTGGAAACAAGGTAACATTTTGTGCACTTAGTAAATCACAAGAAGATGCAAAAATCATTAGAACTGATTTACATCAAGTGAACCTAACATCACCAAGTGAAAGATTCAAAGCACTAGTACCATGTTTTAGAATTGGAATTTTGTTATCAATATTAAGCAAAGAATGCTTAAGCATGCAAAAGGGTAGTTTCGTCTATAGTGATTTCGAAAGGTATAGTATTGGAAACGGTGTTATAATAGAAATGACACCAAACACATGCAAAAGGGTATTTTCGGAAAAGAGAAAATGGTGTTCCGTGAAAGAGGTTTACGAGATTCTAGATGATAGAATCCCACATAGTGAGTTTTTGTTTAAGGTTGTCGAAGACATAAACGACATGAGTTTGGTTTTTAAGCCGAGAGGTATAAGAGTTAAACCGTTGAGTATAGAACAGTTAGTGGAAGCCCTAAAGTATGTTACAAAAGCTTTGGTCGCATTACACGACTTGTCGTTTATGCATAGGGATATAGGTTGGGAGAATGTTATGATGAGGGAGGGTGGTGAGTGGTTTGTGAGCGGCTTCGACGAGGCCGCCGGTGCGCCGGAGTTGAATAAGTATGTTAAGGAAGGTGGCATGGTGGAGCGTGGGAGGCACGCGCCGGAGATGGAGAGAGGGTTGCATGGGGTGAAGGTGGATGTGTGGGGAGTTGGGTATTTGATAATGACAAGTGGGTTGGTGAGTGTGCCGAAGATGATGAGAGAGTTGCAGAATTGGTGTATGGAGCAGAATCCGGAGCAGAGACCTACTGCCGCCGATTGTTATCATCATTTGTTGCAACTTCAGTCGTCTTTGTTGGTGTCAGGTGGTGTTGCCGGTGGTGTTGGGTTGATGTGA 2988 0.3865 MVGDKGDTSKKQQTSSSPKPLHEESSPSQQVIVVTGTNPFISTPLYVSTGASSSPFENQFETTTLNTTKRPRYSGQWKLLPSPTSQQKQLQTQQQLTILNPTTDSKSTTPSPSNPQQQQQPLAASSSDTTSSQSVDHLSPMPGQELGNKQELEQQVHQQLRKGKYVSPVWKPNEMLWLARAWKEQYQTASDSSQQQQLQQNQQQSELGMSRGKTRADKDKEVAEFLNKHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQVGKSYFRLSPYERKLHRLPASFDEEVFEELSQFMGSRMRSSSHGGRIGSSFVSCDETRTRSLPPPRPFKDDELPLSARTKQLTMTSSGGGGGEPFFHRGNILGLDSMIEMSTTPCSNSKELKRIGKIKMTWEESVSLWGEEGEVHRGRVRLQNSSFLHADEITCFDDAMVICPLESFEDGPLKGFSVDRFVSGQQVKVFGRRKSSSASSSGFAERVQQPINKPIPIRSIVPLDFRDPTEYYIDHLLHISSPQSLPTLFELKHYLQEPPPPNLRFPLRKEVYDDLPQGKEFFFTTTSEPLDCRSIIYDIVGPIIRNNINIIANNNNNPSCCTLPFCSRESLIGVWDDCINRVVSRFCCEDIVITRKPFSSSSLSNLQSQDLLLLLQDEWPNVSGFVNNFCLWRGEECEDFKENNHQQNPSSTIIQKLLWSYSDLPYILGYYAIGNKVTFCALSKSQEDAKIIRTDLHQVNLTSPSERFKALVPCFRIGILLSILSKECLSMQKGSFVYSDFERYSIGNGVIIEMTPNTCKRVFSEKRKWCSVKEVYEILDDRIPHSEFLFKVVEDINDMSLVFKPRGIRVKPLSIEQLVEALKYVTKALVALHDLSFMHRDIGWENVMMREGGEWFVSGFDEAAGAPELNKYVKEGGMVERGRHAPEMERGLHGVKVDVWGVGYLIMTSGLVSVPKMMRELQNWCMEQNPEQRPTAADCYHHLLQLQSSLLVSGGVAGGVGLM 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04070 995 MobiDBLite consensus disorder prediction 301 320 - -
Vifa1g04070 995 MobiDBLite consensus disorder prediction 189 217 - -
Vifa1g04070 995 MobiDBLite consensus disorder prediction 7 139 - -
Vifa1g04070 995 MobiDBLite consensus disorder prediction 1 145 - -
Vifa1g04070 995 SUPERFAMILY Protein kinase-like (PK-like) 815 975 IPR011009 -
Vifa1g04070 995 Gene3D Transferase(Phosphotransferase) domain 1 836 982 - -
Vifa1g04070 995 PANTHER OSJNBA0043A12.37 PROTEIN-RELATED 111 873 - -
Vifa1g04070 995 MobiDBLite consensus disorder prediction 301 335 - -
Vifa1g04070 995 MobiDBLite consensus disorder prediction 189 210 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04070 796 974 MAP Kinase Kinase Kinase AT1G53570 24.051 6.22e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Cr-1 Vifa1g04070 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04070 - - gmx:100793127 1146.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04070 1 626366371 626370756 Vifa1g04070 1 626366371 626370756 ECH