Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g04051 | ATGGCTTACTCTAAAATTCTCCTTTTCTATATCTTTGTTAGGTTCATCTGTTTTGCAACAATAAATGCACAAGATAATCCTACTTTCTTGTATAACTTTTGTTCTGAAAACGAAACCACCACAGCCAATAGCACATTCCATGTCAATCTCATGACCCTCCTCTCATCTTTGTCATCAAAATCAAATGAGAACACGGAATTCTACAACACCACAGGCACTGCCATAAACTCCTCCGACTCTGACGATGCTTATGGATTGTTCATGTGCAGGGGGGATGTACCCTCCCAGCTCTGTCACGAATGCATAGTTAATGCAACCCAAAAACTATCCTCTGACTCAGACTGCTCTTTGTCTAAACGAGCGGTGATTTGGTACAACGAATGCATGGTTCGATACTCCAACAACTCTTTCTTTTCCACTGTTTATACAAGTCCTGGTATTTCCATGATAAACACCAACAACGTCTCAAACCCGAAAAGCTTCATGCCTTTATTGTCTTTGACTATGAATCAAACTGCAGAAGAAGCAGCAAACAATAACAAGATGTATGCCACAAATGAAGCAAAAGTTTCGAAATTTCAGACACTTTACTGTCTAGCTCAGTGCACGCCAGACTTGTCGCCCAATGATTGCAGAACCTGTCTCAGTGCTGGTATTGGTTTTCTTCCGCGGTGTTGTGATGGAAAGCAGGGTGGGAGAGTTCTATTTCCTAGCTGTAACGTTAGGTACGAACTATATCCTTTTTATAGATCTAGTAATGCTTCCCCAACAAATAGGCTTGTTCCAGAAACAAATGACTCCAAACAAGATGCAGATTTTTCAAAAGATCCATTTTATCTTGGCTACAACTGCTCAAGTAGCAACAGTACAATCACTGAGAAAAACTTCAAATCACTTCTCTCTTATTTGTCTTCCAGTACCACAAGCGGCAGAACATTTTACACAACCAATGTGGAAGACCTGGTGTACGGCCTCTTCATGTGTCGAGGTGACCTTCCCTCTAGCCTCTGCGGTGAATGCGTGAAAAACGCAACAGATCGAATATACTCCAACTGTCTTTCATCTCCGGAGGGTATAATTTGGTACAGCCACTGCTTGGTTCGCTATTCTTATCAGAGTCTCTTCTCAAACATGGAAACTAGCCCTATGTATCGCAATATTAATATCACCACATACTCCATCTCGGACCAAAACCTCTTCACTAACATATTATCTAATCACTTATCTCAACAAGCGGATGATACAGCAGATAGTGCTGATAAATATACGACCAACTCGTTAAAATTGAACGATGTACAAACATTGTATACACTTGAACAATGTACTCCAGATTTGTCTAGTGGCGAATGCTCTTCATGTCTAAAAGATATAATCGGTGAATCAATCCCATGGTCATATTTGGGAAGTATTGGAGGAAGAATAATATATCCTAGCTGCAATCTCAGGTTTGAATTGTTCCAATTTTACAACCAGGTTGGTGAAGCTCAGCCGCCTGGTACTCCTCCATTACCAGGGACTCCTCCATCACGAAATAAAGAGAAATGGAGACTTGTCGCCATCGTTGTCCCTGTCGTTATTTTGGTGGTGCTCTTTCTTATTGGCTACTACTATGTTCTAAAGAGAAAGGGAAGAAAAAGTCGTAGAACCATTCTTCGAGAAAATTTTGGTGAAGAAAGTGCCACTTTAGAACCCATGCGATTTGATTGGGTGGTGATTGAAGCAGTAAGTAACAATTTTTCTAAAGATAACTACATCGGCAAAGGTGGATTTGGAAAGGTTTACAAGGGTACTCTTTTGGATGGACGACAAGTCGCTATAAAAAGACTTTCAATAAACTCTAAGCAAGGTGTTGAGGAGTTCAAAAATGAAGTTTTATTGATAGCTAAGCTTCAACATAGAAATCTAGTAACATTTATTGGTTTTTGTCTTGAAGAACACGAGAAAGTACTTATTTATGAATTTGTGCCCAACAAGAGTCTTGATTACTTTTTATTTGATTCTCAATGCAAAAAGTCGCTAACTTGGGTTGAACGCTTCAATATAATTGGAGGAATTATTCGGGGAATTCTTTATATGCACGAACTTTCCCGACTTAAAGTTATACATCGCGATCTCAAACCTAGTAATATTTTATTAGATGAAAATATGATTCCTAAAATTTCTGATTTTGGTTTGGCTCGAATTGTTGAAATAAGTCAAGATAAAAGAACTACAAAAAGAATTATTGGGACATACGGTTATATGCCTCCGGAATATGCAATGTTTGGAAAATATTCTGAAAAATCAGATATTTATAGTTTTGGAGTCATGCTTTTAGAGATTATTGCTGGAAGAAAGAATATGAGTTCATCTACGCAATACCATGATGCTGAAGGGGTTAATGGACTATTGAATCATGTTTGGAGACAATGGAAGGATCAAACACCGTTGAGTATATTGGATCCAAATATTGAAGATGATTATTCGAAAATTGAAGTAACCAAGTGTATTCAAATTGGTCTATTATGTGTTCAACATAACCCAGATGCTAGACCTTCAATAGTGACAATTACTTCTTATCTTAGTAATTATTCAATTGAATTACCAACTCCACAAGAACCTATATTTTTCCACTATGGTAGAACTATTTCAAAATCTCATGCCCAAGAATCAAGTTCAACTCAATCTGCAAATAATTCGTCTCTATTCTCTTTGAATGAAATGTCTATCAGTAATTTTATTCCTAGATAG | 2730 | 0.3777 | MAYSKILLFYIFVRFICFATINAQDNPTFLYNFCSENETTTANSTFHVNLMTLLSSLSSKSNENTEFYNTTGTAINSSDSDDAYGLFMCRGDVPSQLCHECIVNATQKLSSDSDCSLSKRAVIWYNECMVRYSNNSFFSTVYTSPGISMINTNNVSNPKSFMPLLSLTMNQTAEEAANNNKMYATNEAKVSKFQTLYCLAQCTPDLSPNDCRTCLSAGIGFLPRCCDGKQGGRVLFPSCNVRYELYPFYRSSNASPTNRLVPETNDSKQDADFSKDPFYLGYNCSSSNSTITEKNFKSLLSYLSSSTTSGRTFYTTNVEDLVYGLFMCRGDLPSSLCGECVKNATDRIYSNCLSSPEGIIWYSHCLVRYSYQSLFSNMETSPMYRNINITTYSISDQNLFTNILSNHLSQQADDTADSADKYTTNSLKLNDVQTLYTLEQCTPDLSSGECSSCLKDIIGESIPWSYLGSIGGRIIYPSCNLRFELFQFYNQVGEAQPPGTPPLPGTPPSRNKEKWRLVAIVVPVVILVVLFLIGYYYVLKRKGRKSRRTILRENFGEESATLEPMRFDWVVIEAVSNNFSKDNYIGKGGFGKVYKGTLLDGRQVAIKRLSINSKQGVEEFKNEVLLIAKLQHRNLVTFIGFCLEEHEKVLIYEFVPNKSLDYFLFDSQCKKSLTWVERFNIIGGIIRGILYMHELSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVEISQDKRTTKRIIGTYGYMPPEYAMFGKYSEKSDIYSFGVMLLEIIAGRKNMSSSTQYHDAEGVNGLLNHVWRQWKDQTPLSILDPNIEDDYSKIEVTKCIQIGLLCVQHNPDARPSIVTITSYLSNYSIELPTPQEPIFFHYGRTISKSHAQESSSTQSANNSSLFSLNEMSISNFIPR | 909 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g04051 | 909 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 700 | 712 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa1g04051 | 909 | Pfam | Protein kinase domain | 580 | 850 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g04051 | 909 | FunFam | cysteine-rich receptor-like protein kinase 10 | 655 | 861 | - | - | |
Vifa1g04051 | 909 | ProSiteProfiles | Gnk2-homologous domain profile. | 380 | 488 | IPR002902 | - | |
Vifa1g04051 | 909 | ProSiteProfiles | Gnk2-homologous domain profile. | 274 | 374 | IPR002902 | - | |
Vifa1g04051 | 909 | ProSiteProfiles | Gnk2-homologous domain profile. | 28 | 137 | IPR002902 | - | |
Vifa1g04051 | 909 | ProSitePatterns | Protein kinases ATP-binding region signature. | 585 | 607 | IPR017441 | GO:0005524 | |
Vifa1g04051 | 909 | ProSiteProfiles | Protein kinase domain profile. | 579 | 854 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g04051 | 909 | FunFam | Cysteine-rich receptor-like protein kinase 25 | 382 | 488 | - | - | |
Vifa1g04051 | 909 | Gene3D | - | 26 | 137 | IPR038408 | - | |
Vifa1g04051 | 909 | Gene3D | - | 145 | 248 | IPR038408 | - | |
Vifa1g04051 | 909 | Gene3D | - | 381 | 488 | IPR038408 | - | |
Vifa1g04051 | 909 | Gene3D | - | 279 | 373 | IPR038408 | - | |
Vifa1g04051 | 909 | Gene3D | Transferase(Phosphotransferase) domain 1 | 655 | 863 | - | - | |
Vifa1g04051 | 909 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 | 27 | 136 | - | - | |
Vifa1g04051 | 909 | SUPERFAMILY | Protein kinase-like (PK-like) | 562 | 890 | IPR011009 | - | |
Vifa1g04051 | 909 | ProSiteProfiles | Gnk2-homologous domain profile. | 143 | 248 | IPR002902 | - | |
Vifa1g04051 | 909 | Gene3D | Phosphorylase Kinase; domain 1 | 542 | 654 | - | - | |
Vifa1g04051 | 909 | SMART | serkin_6 | 579 | 854 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g04051 | 909 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 294 | 905 | - | - | |
Vifa1g04051 | 909 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 | 540 | 654 | - | - | |
Vifa1g04051 | 909 | Pfam | Salt stress response/antifungal | 290 | 370 | IPR002902 | - | |
Vifa1g04051 | 909 | Pfam | Salt stress response/antifungal | 154 | 246 | IPR002902 | - | |
Vifa1g04051 | 909 | Pfam | Salt stress response/antifungal | 34 | 134 | IPR002902 | - | |
Vifa1g04051 | 909 | Pfam | Salt stress response/antifungal | 398 | 484 | IPR002902 | - | |
Vifa1g04051 | 909 | FunFam | Cysteine-rich receptor-like protein kinase 25 | 145 | 248 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g04051 | Vifa-Chr1 | 622258763 | 622262747 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g04051 | 274 | 909 | Receptor kinase-like Gene Family | AT4G05200 | 42.279 | 5.23e-167 | 501 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vifa1g04051 | Pkinase | 1.1e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g04051 | - | - | gmx:100806048 | 1020.38 |