Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04026 ATGATGAAAATGGTTCTTTTGTTTTTCTTTGCCTCTGCACTTATCCTTTCAGTTTGTGAGTCCTATGATGTTTCTTTGCAACCTCATGCTTTAGATTCCTTTGATGTTGGTTATATCCAGATGAAAGGTGCTCAAAACTGTTCTTATTTGGTGATGATTACAACAAGCTGTTCTTCTCCAAAGTTTAATAGTGATGAGATCAGTATTGCTTTTGGAGATGCTAATGGAAACCAGGTATACGCAGCAAAACTAGACGATTCACTTTCAAGAACATTCGAGCAATGTGCATCAGATTCATTTCAAATAGATGGTCCATGTGTATCACCAATTTGTTCACTCTATCTATACAGAAAAGGTTCATCAGATGACTATGGTTGGAAGCCAGAAAGTGTGAAAATCTATGGATACAATTCAGATCCTGTTACTTTTACTTTTAACACCTCCATTCCTAAAGATGTATGGTATGGATATAACTTGTGTGATACTCCTCCTCCTCCTCCTCCTCCTCCATCTTCTTCCATTCAAATGTCTGTTCAGAAATGGGTTTTGTTTGTAATGGTTTTAGGTTCTGTTTTTAGTATTTGGATGTAA 591 0.3638 MMKMVLLFFFASALILSVCESYDVSLQPHALDSFDVGYIQMKGAQNCSYLVMITTSCSSPKFNSDEISIAFGDANGNQVYAAKLDDSLSRTFEQCASDSFQIDGPCVSPICSLYLYRKGSSDDYGWKPESVKIYGYNSDPVTFTFNTSIPKDVWYGYNLCDTPPPPPPPPSSSIQMSVQKWVLFVMVLGSVFSIWM 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04026 196 CDD PLAT 47 160 - -
Vifa1g04026 196 Gene3D PLAT/LH2 domain 47 155 - -
Vifa1g04026 196 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 5 167 - -
Vifa1g04026 196 Pfam Embryo-specific protein 3, (ATS3) 40 160 IPR010417 -
Vifa1g04026 196 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 45 157 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04026 Vifa-Chr1 618289221 618290813 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04026 - - gmx:100305526 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03105 3 892537322 892538736 Vifa1g04026 1 618289221 618290813 PCT