Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04018 ATGGCCAACAAATATTCTACTGTGCTTCAGTTCTGGTTTTGCGTTATCTGCATCCTGATCTGTGCTAGGGTTTGTTCTCCTGCTAGATCCGATAAGGAAACGAGGGATAGGTTTTATGGTAATATGCTTAATTCGTCCGCGCCGGAATCCAATGATGGGACTTTGGCTAAGATGTTCGATCGTGTTCTTGAGAAGGAGTTTTCTGAGAATGATACACCTGAAGAACCTGATAAAAACAGCTTCAATAACAGTGTAGCTGATCAGCAGGCAGTATTGGAGACTGTAGCTAAAATTACTCATGATAAAGCTAAGAGAAATGATACGCGTGAGGGAAATGGCACAAGATCATTTCAGTTTCAAGATGTCTTCTCTCTGGAAAATGAAGATTCTGATGATGTGACAACTTTGATTGACAAAAAGGACAATGTCTTTGTGATGTCAAACAAGAAATCCAAATATCCTGTGCTTCAAGTGGATTTGAGGCTAATATCAGATTTGGTGGTCATCATAGTTTCTGCGGCCATCGGTGGAATAGTCTTTTCCTGTTTGGGGCAACCGGTTATTGTGGGGTATCTTCTTGCAGGCTCCCTTATTGGACCAGGGGGTTTGAAATTCATCAGTGAAATGGTACAGGTTGAGACTGTTGCTCAATTTGGGGTAGTGTTTCTTCTCTTTGCTTTGGGGCTGGAGTTTTCCCTAGCAAAGTTAAAAGCTGTGGGGCCTGTTGCTGTTCTTGGAGGACTGCTTCAAATTGTAATATTCATGTTCCTTTGCGGAATTCTTGCCATGTTATGCGGAGGAAAACTGTCTGAGGGTGTTTTTGTTGGTTCCTTTCTTTCAATGTCATCCACAGCAGTGGTAATTAAGTTTTTGGTGGAGCGGAATAGTAACAATGCTCTTCATGTTCAAGTTACAATTGGCACTCTTATTTTTCAGGATTGTGCAGTGGGTTTACTATTTGCTTTACTCCCTGTTTTGGGTGGTAACAGTGGTCTTTTACAAGGGATTATTTCAATGGGAAAACTGTTGCTAGTACTGTCCTTGTATCTCACTGCTACATCAATACTGACTTGGTCGTTTGTTCCTCGCTTTCTCAAACTGATGATGCGGCTCTCATCTCAGACAAATGAACTTTATCAGCTAGCCGCTGTTGCTTTCTGCTTGTTATCTGCATGGTGCAGTGATAAGCTTGGTCTTAGTCTTGAGCTGGGTTCATTTATGGCAGGTGTTATGATTTCCACAACAGACTTTGCTCAACATACTTTGGACCAGGTGGAACCAATTCGGAACCTATTTGCAGCTCTCTTCCTCTCAATCACAAAGGCCTTTGGTTATAGTCTTAAGACAGCATTTGTTGTTGGTATCTCACTTGCTCAAATTGGAGAATTTGCTTTTGTTCTGCTGGGTCGTGCTTCCAATCTTCATCTTGTTGAGGGGAAAATGTATCTTCTCCTTTTAGGGACAACGGCTCTCAGTCTGGTCACAACGCCGCTTTTGTTTAAATTGATTCCGGCTGTCATGAATCTGGGTGTTCTCATGCACTGGTTTCCCTCTGAAAATGGCTCGCAAAATGAGGGGAAAGCTTTGATGATCGAGGCAAACAGAATGTTGTGA 1614 0.4226 MANKYSTVLQFWFCVICILICARVCSPARSDKETRDRFYGNMLNSSAPESNDGTLAKMFDRVLEKEFSENDTPEEPDKNSFNNSVADQQAVLETVAKITHDKAKRNDTREGNGTRSFQFQDVFSLENEDSDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVIIVSAAIGGIVFSCLGQPVIVGYLLAGSLIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLAKLKAVGPVAVLGGLLQIVIFMFLCGILAMLCGGKLSEGVFVGSFLSMSSTAVVIKFLVERNSNNALHVQVTIGTLIFQDCAVGLLFALLPVLGGNSGLLQGIISMGKLLLVLSLYLTATSILTWSFVPRFLKLMMRLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFAQHTLDQVEPIRNLFAALFLSITKAFGYSLKTAFVVGISLAQIGEFAFVLLGRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPAVMNLGVLMHWFPSENGSQNEGKALMIEANRML 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04018 537 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 14 438 IPR045158 GO:0015386|GO:0071805|GO:1902600
Vifa1g04018 537 Gene3D - 160 438 IPR038770 -
Vifa1g04018 537 Gene3D - 439 508 IPR038770 -
Vifa1g04018 537 Pfam Sodium/hydrogen exchanger family 167 437 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa1g04018 537 Pfam Sodium/hydrogen exchanger family 439 501 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04018 Vifa-Chr1 617181236 617188084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04018 28 534 Antiporters AT5G51710 77.491 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04018 K26735 - gmx:100810302 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04018 1 617181236 617188084 Vifa1g04018 1 617181236 617188084 ECH