Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03983 ATGTCCGAACACGCTCGCGCACTTGTCAAAGCTAATAATCTTGAGAATGTAGTTCAAGTCATTGAGGGCTCCATGGAGGATGTTACCTTGCCGGAGAAAGTTGATGTCATCATATCTGAATGGATGGGCTATTTTCTTCTAAGAGAATCTATGTTTGATTCTGTTATATCTGCTCGTGACCGCTGGCTCAAACCAACAGGAGTCATGTATCCCAGTCATGCTCGCATGTGGATGGCACCTATCAGGACTGGGATTGTAGAACAGAAATTGGATGATTACCAGTCAGCTATGGGTGATTGGCACAACTTTGTCGATGAAACTAAAGCCTGCTATGGTGTTGATATGAGCACCTTGTCAAAGCCTTTTGCAGAGGAGCAGAGGAAATACTATCTACAGACATCACTGTGGAGCAATCTTCATCCACATCAAGTTATAGGAACTGCTGGTATAGTAAAGGAAATTGACTGTTTGACTGCCACAGTGGCGGACATAGAGAAAGTCAGATCAAAATTTTCTCTATCAATAACCATGGATAATACAAAATTGTGTGGATTTGGAGGGTGGTTTGATGTACATTTCCGGGGACAAAGTGAGGATCCAGCTGAACATGAGATTGAATTAACTACTGCTCCTAGTACAGATTACTGTACACACTGGGGCCAGCAGGTTTTCCTTTTAAATCCTACTGCACATGTGGGTGAAGGTGATGAGCTAAGTGTTAGTTTTCTCATGAGTCGTTCAAAGGAAAACCATCGTTTGATGGAGGTTGAGCTTGGGTGTGAGATTCAAAAACATTCTGGCAAGCTTGTTGCACCTTTCAAAAATAAGTACTACATTGAATGA 843 0.4223 MSEHARALVKANNLENVVQVIEGSMEDVTLPEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHARMWMAPIRTGIVEQKLDDYQSAMGDWHNFVDETKACYGVDMSTLSKPFAEEQRKYYLQTSLWSNLHPHQVIGTAGIVKEIDCLTATVADIEKVRSKFSLSITMDNTKLCGFGGWFDVHFRGQSEDPAEHEIELTTAPSTDYCTHWGQQVFLLNPTAHVGEGDELSVSFLMSRSKENHRLMEVELGCEIQKHSGKLVAPFKNKYYIE 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03983 280 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 264 IPR029063 -
Vifa1g03983 280 FunFam Protein arginine N-methyltransferase PRMT10 73 280 - -
Vifa1g03983 280 Gene3D Vaccinia Virus protein VP39 1 71 IPR029063 -
Vifa1g03983 280 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 264 IPR025799 GO:0016274|GO:0018216
Vifa1g03983 280 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 1 257 IPR025799 GO:0016274|GO:0018216
Vifa1g03983 280 Gene3D - 73 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03983 Vifa-Chr1 612139236 612143332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03983 31 239 C2H2 Transcription Factor Family AT3G12270 31.336 1.80e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03983 K11434 - gmx:100790625 508.834