Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03976 ATGGATCCTAATCAATTTCATTATCAACAAGCTATGTTCAATTTCATGCAAAATTATCAAAATCATAATCCTCAAAATTCTCAAATTCCATCGATGCCAACAAACCCCGCCATATTTTTTCCATCACCAAACAATCCAAATATGTATCATATACCTCAAATGAATTCTAATAGTATGGAATTTTCTACCCAAGTTCCACCATTTTCTACTCAAGATCCAATTGTGGGAGTTGATCAAAAGGCTGAGAGTTTTTGGTTAAGAATAGCTGCCAATTATAACCAGTATCGTGGGCAATCGCGGGAAAAGTTAGGGGGGCAATTAAAATGCCGATGGCATAGAATAAATGGTTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATGGAAAGAAAAGTGGGACATCAGATAACGATATCATGGCCTCTGCACATGCTTTTTTTGCTCAGGATGAAGGTACAACATTCAATCTTGAGTACGCATGGCGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGGAAATTCTTCAAAAGTAACAAAGACTTATGCTAGTGGGGCATCATCGGCTAACTCAGATACACCTTCAAGTTACGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGACAAAGGAAATTCCAAATGCAACACAAGATGCAAGGAATAAAAGAGCAGCAGCAATGGAAAGACTAGCTCACAGTAAGGAGGACGAGCTAGAATTAAAGGCAATGCAAATCATCATGAAAGACACTTCTACTATGAGTGATAGTCAACGAGATATTCATGAAAAATATTGTAATAAGATGGAAAAAAAATATGGATTGTAG 873 0.37 MDPNQFHYQQAMFNFMQNYQNHNPQNSQIPSMPTNPAIFFPSPNNPNMYHIPQMNSNSMEFSTQVPPFSTQDPIVGVDQKAESFWLRIAANYNQYRGQSREKLGGQLKCRWHRINGLVQKFVGCYKQAVNGKKSGTSDNDIMASAHAFFAQDEGTTFNLEYAWRLLKDEPKWMGESIGNSSKVTKTYASGASSANSDTPSSYEFNSSSPMERPMGQKAAKRKGKTKEIPNATQDARNKRAAAMERLAHSKEDELELKAMQIIMKDTSTMSDSQRDIHEKYCNKMEKKYGL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03976 290 Pfam No apical meristem-associated C-terminal domain 156 274 IPR029466 -
Vifa1g03976 290 PANTHER - 70 287 - -
Vifa1g03976 290 MobiDBLite consensus disorder prediction 189 228 - -
Vifa1g03976 290 MobiDBLite consensus disorder prediction 189 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03976 Vifa-Chr1 611425366 611426329 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03976 74 224 Glutathione S-transferase Gene Family AT5G41240 33.540 2.52e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03976 - - psat:127115199 434.876