Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03940 ATGTCTCAAATTACGCAGAGAATTATATTGCTATGTGTGTTGATGTTATTATTAGTGCACAAAATGTTTGCAATTCATGTCAATATTATCAACTCTTTAGAAGATAATTTAGATCTAACTGTTCATTGCAAATCCGCAGATAATGATCTGGGAGTTCATCTTCTGCATCATCGTGAGAATTTTGGTTGGAGTTTTGGAGTTGGTGTTTTTAAGGGTACATTATTCTATTGTGGCTTTACATGGAATGGTCAATTACATTGGTTTAATATATTCAAAAAAACTGATAAAGAAACATCTGATTGTACTGAATGTGAATGGCATATATTTAAATCAGGACCATGTCGAACCCTAACTTCCAGTACCACATCTTGCTTTCCGTGGAATAAGAACAAATAG 396 0.3308 MSQITQRIILLCVLMLLLVHKMFAIHVNIINSLEDNLDLTVHCKSADNDLGVHLLHHRENFGWSFGVGVFKGTLFYCGFTWNGQLHWFNIFKKTDKETSDCTECEWHIFKSGPCRTLTSSTTSCFPWNKNK 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03940 131 PANTHER - 26 116 IPR010264 -
Vifa1g03940 131 Pfam Plant self-incompatibility protein S1 26 127 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03940 Vifa-Chr1 604665037 604665432 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03940 27 128 Carbohydrate Esterase AT3G16970 42.991 9.70e-24 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03940 - - cam:101513244 150.599