Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03937 ATGAATTTGCCGTCTTCAACCAGGACAGTTAAAGCCCTGAGTGAGGTTGAAGCTTTTGCTCTTCGAGCTGAAGACCTAAAGTTTGTCGCTAATCAGTTTAGGCGTCTCCACAGCAAAAAGCTGCAGCACACCTTTCGATTTTACTCTCACCATTGGAGGACTTGGGCCGCTTGTTTTATACAGGCTGCTTGGCGTAGATATAAGAAAAGGATGTCTGCCAAAGATCTCAGTTTTAGAGAATCCCTTCCTTTAGACGAGACAGAGGCCAGTGAGAGAGAACATGAAGAGGAATATCCTACTGGTTCAAACTCATCTCAGGCTAAAATGAATCTCGGGGTCACAATTCTTGCTTCAAGGTTTGCTGCTAACACACGTAGAGGAGCACTAAAGATGAAAGATGACTTGCCTAAGCTACGAAAGCCTGAAGAACCCGACTTCACCACCGAAGCAGATGACGATTAA 462 0.4502 MNLPSSTRTVKALSEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRMSAKDLSFRESLPLDETEASEREHEEEYPTGSNSSQAKMNLGVTILASRFAANTRRGALKMKDDLPKLRKPEEPDFTTEADDD 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03937 153 Gene3D Jelly Rolls 1 35 IPR014710 -
Vifa1g03937 153 MobiDBLite consensus disorder prediction 82 106 - -
Vifa1g03937 153 MobiDBLite consensus disorder prediction 131 153 - -
Vifa1g03937 153 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 2 146 - -
Vifa1g03937 153 MobiDBLite consensus disorder prediction 82 99 - -
Vifa1g03937 153 MobiDBLite consensus disorder prediction 131 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03937 Vifa-Chr1 604388620 604389081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03937 1 152 Ion Channels AT4G30360 68.590 3.71e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03937 K05391 - gmx:100810967 270.396