Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03881 ATGCTTGATAATCCATCTTTTGCATTATTTGAAGATTATCTAATAATGGCTAATTTGCTTACACTGTTTTTTGTCATAATGAGTTGTTTCAAATTAGGAGTATATGGATTGAGCATGAACTACTACTTGTTTAGCTGCCCTTTTGTTGATTCTGTTGTTAAAAACGATGTCAACAAAGCTCTGCAGGATGATCCCACCCTAGCAGCAGGTTTAGTTAGAATGCACTTCCATGATTGTTTCATAGAGGGATGTGATGGGTCAGTTCTAATAGACTCCACTAAGGAGAACACAGCAGAAAAAGATTCACCTGCAAATTTGAGCTTGAAAGGATACAAAGTCATAGATGATATCAAACTAGAGCTTGAAAAGCAATGTCCTGGAGTGGTTTCATGTGCTGATATTCTTGCCATGGCTGCTAGAGATGCTGTTTTCTTTGCTGGTGGTCCTGTGTATAACATACCAAAAGGAAGGAAAGATGGAACAAGGTCTAAAATTGAGGATACTTTCAATCTGCCTCCTCCATTTTTCAATGTATCTCAGCTCATTAGGATGTTTGGCCAACATGGTTTTTCTCCAAAAGACATGGTGGCTCTTTCCGGAGCTCACACACTAGGAGCAGCAAGGTGTGTTTCTTTCAAGGAAAGACTAACCCAATTGGATCAAACATTGGATTCAGAATTTGCAAAAACACTCTCCAAAACATGCAACATTGGTGACAATGCTGAGCAACCTTTTGATGCAACAAGAAACGATTTTGATAATTCATACTTCAATTCTTTGGTCTCAAACAATGGTGTTCTTACTTCGGACCAAACATTGTACAATAGCGCACAAACTAGGAACATTGTGAACATGTATGCAATGAATCAGGCATTGTTCTTCTTGGATTTTCAACAAGCTATGGTGAAGATGAGCTTGCTTGATGTAAAAGAAGGTTCTAAGGGGGAAGTAAGAAAAAATTGCCATAAAATAAATTGA 978 0.3793 MLDNPSFALFEDYLIMANLLTLFFVIMSCFKLGVYGLSMNYYLFSCPFVDSVVKNDVNKALQDDPTLAAGLVRMHFHDCFIEGCDGSVLIDSTKENTAEKDSPANLSLKGYKVIDDIKLELEKQCPGVVSCADILAMAARDAVFFAGGPVYNIPKGRKDGTRSKIEDTFNLPPPFFNVSQLIRMFGQHGFSPKDMVALSGAHTLGAARCVSFKERLTQLDQTLDSEFAKTLSKTCNIGDNAEQPFDATRNDFDNSYFNSLVSNNGVLTSDQTLYNSAQTRNIVNMYAMNQALFFLDFQQAMVKMSLLDVKEGSKGEVRKNCHKIN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03881 325 ProSiteProfiles Plant heme peroxidase family profile. 36 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 SUPERFAMILY Heme-dependent peroxidases 36 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Vifa1g03881 325 CDD secretory_peroxidase 36 324 IPR033905 GO:0004601|GO:0042744
Vifa1g03881 325 Gene3D - 40 325 - -
Vifa1g03881 325 Gene3D Peroxidase, domain 2 172 304 - -
Vifa1g03881 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 PRINTS Plant peroxidase signature 109 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 FunFam Peroxidase 40 174 - -
Vifa1g03881 325 FunFam Peroxidase 172 304 - -
Vifa1g03881 325 PRINTS Haem peroxidase superfamily signature 129 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 Pfam Peroxidase 53 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g03881 325 ProSitePatterns Peroxidases active site signature. 68 79 IPR019794 GO:0004601
Vifa1g03881 325 PANTHER - 21 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03881 Vifa-Chr1 597895079 597897895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03881 14 325 Peroxidase AT4G33420 69.427 1.70e-164 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03881 K00430 - gmx:100809245 539.65