Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03872 ATGTCGTCTCCAACCAAACCCAAACCCGTTCTTCCTTGGAAAACTCGCCTTTCGATTTCACTCGTAACGACTTTAACGGACGCTGCATGCCGATCTGACGGAACCATTAACCGCCGTTTTCTTGGCGTCTTAGATCGTAAAGCTTCCGCTAAAGCCACTCCTATTAACGGCGTTTCAACCAAAGACGTTACCGTTAGTGACGAACATAACGTTTGGTTCCGTCTCTACACACCCGCCGTAACCGTCGCCAAAGATGGATCTGACACCAAAACTGCATCTCTTCCAGTGATGATTTTCTTTCACGGCGGTGGATTTTCGCATCTCTCCCCTGCCTCAATCGGATACGACGCCGTGTGCCGTAGATTCTGCCGTAAAATCTCCGCTGTTGTAGTCTCCGTCAACTACCGTCTCACTCCGGAGCATCCTTATCCGTCGCAATACGACGATGGAGAATCCGTGTTGAAATTTCTCGACGAGAACAAATCTGTGTTACCGGAAAATGCTGACGTGTCAAAATGTTTCCTCGCCGGGGACAGTGCCGGTGCAAATCTAGCACACCACGTGGCGGTTCGGGTCTGCAAAGCGGGGCTCCAGAGAATCCGGGTCGTCGGGTTGATTTCGATCCAACCGTTCTTCGGGGGTGAGGAGCGGACGGAAGCCGAGATTCGTCTCGAGGGATCGCCGCTGGTGTCGATGGCGAGGACTGATTGGCTGTGGAAGGTGTTTTTGCCGGGATCGGATCGGGATCATGGTGCGGTTAATGTCTGCGGGCCGAATGCAGAGGATTTGACGGGTTTGGATTATCCGGATACTGTTGTTTTTGTGGGCGGATTTGACCCGTTAAATGATTGGCAAAGGAGGTATTGTGATTGGTTGAAGAAATCAGGAAAGAATGCTGAGTTGATTGAGTATCCTAATATGATTCATGCTTTTTATATTTTTCCTGATTTGCCTGAAGCTACTCAGTTGATTATGCAAGTTAAGGATTTTATTCACAAGAGAGTTTAA 1008 0.4921 MSSPTKPKPVLPWKTRLSISLVTTLTDAACRSDGTINRRFLGVLDRKASAKATPINGVSTKDVTVSDEHNVWFRLYTPAVTVAKDGSDTKTASLPVMIFFHGGGFSHLSPASIGYDAVCRRFCRKISAVVVSVNYRLTPEHPYPSQYDDGESVLKFLDENKSVLPENADVSKCFLAGDSAGANLAHHVAVRVCKAGLQRIRVVGLISIQPFFGGEERTEAEIRLEGSPLVSMARTDWLWKVFLPGSDRDHGAVNVCGPNAEDLTGLDYPDTVVFVGGFDPLNDWQRRYCDWLKKSGKNAELIEYPNMIHAFYIFPDLPEATQLIMQVKDFIHKRV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03872 335 PANTHER ARYLACETAMIDE DEACETYLASE 31 315 - -
Vifa1g03872 335 Gene3D alpha/beta hydrolase 3 335 IPR029058 -
Vifa1g03872 335 Pfam alpha/beta hydrolase fold 97 312 IPR013094 GO:0016787
Vifa1g03872 335 SUPERFAMILY alpha/beta-Hydrolases 13 333 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03872 Vifa-Chr1 596655200 596656207 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03872 6 332 Carbohydrate Esterase AT3G05120 37.313 3.44e-73 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03872 - - gmx:100799285 496.123