Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03869 ATGGATCTGTCTTCTTCTTATTTCTTCTCAGATTCGATTTCTCACCATTCCACTATCAGTGTCTCCATTATTCCACAACTGGTATGTTATGGACTAACTACTTTGTATTTGACTGAGGTTCGATATCTCCATAATCATGTTGGTTTTACTACTGCTGTTGATTTAAATTGTAACTCCACTATTGATTTTTCTGCGTCAATTGGTACTTCTGGCATTGATTTTGCTCTAACAAGTATTGTAGATCATATGAGCAAAGATATCACTGCCTTGGCTCCTAGAAGCATGCATATTAAGGTTATTACTCCACCAGAGAGAAAGTACATTGTTTGGATCATTGGATCGATCCTTGCATCCTACAACACTTTCCAGCATGGATAG 378 0.373 MDLSSSYFFSDSISHHSTISVSIIPQLVCYGLTTLYLTEVRYLHNHVGFTTAVDLNCNSTIDFSASIGTSGIDFALTSIVDHMSKDITALAPRSMHIKVITPPERKYIVWIIGSILASYNTFQHG 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03869 125 Gene3D - 11 108 - -
Vifa1g03869 125 SUPERFAMILY Actin-like ATPase domain 70 124 IPR043129 -
Vifa1g03869 125 Pfam Actin 76 124 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03869 Vifa-Chr1 596227024 596227883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03869 55 124 Cytoskeleton Gene Families AT3G18780 55.556 7.10e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03869 K10355 - psom:113289774 74.7146