Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03860 ATGACTTCAAACACCACACCACTCCTTCCATGGAAGGTTCGCTTCACCATGTCTACCATTTCTTCTCTCATTTCCGCCTCTCACCGCTCCAACGACACCGTCAACCGCCGTCTCTTCAACTTTTTTGATAGAAAAGTCCCTCCTAACTCTAACTCCAAAGATGGAGTTTCTTCCTCTGACGTCATCGTGGACCCCACGCGCAATCTCTGGTTTCGCCTTTTTACTCCTTCCTCAAACTCTGTCTCCGACGCACCTCTCCCCGTCTTCGTGTTTTTTCATGGCGGCGGTTTTGCATTGTCTTCTCCGTCTTCTATCGTGTACAACAATATTTGTCGTTTATTCTGTCGTTCGTTTCCCGCAATTATTGTATCTGTTAATTATCGTCTTGCCCCTGAGCATCGTTTTCCATCGCAATACGATGATGGTTTGGAAATCCTTAAATTCCTCGATCAAAATAACAATGTTTTAGGCAAATCTGCTGACATCAGCAAATGTTTTTTGTCGGGTGATAGTGCGGGTGGAAATATAGCCCATCATGTAGCGGTTCGGATTCCCTTAGAAAAGTTTCAAACTTTGAAAATTATCGGTTTAGTTTCAATACAACCGTTTTTTGGAGGTGAGAAAAGAACTGAATCTGAGATCCGGTTCAAACGGGCACCTACTGTTTCGATGGATAAAACTGATTGGTATTGGAAGATGTTTTTGCCATATGGGTCAACCCGTGACCATCAAGTAGTTAATGTTAGTGGGCCTAATGCAATGGATATTTCTAATGTGGATTATCCGAATACCCTTTTGTGTGTTGGTGGGTTAGACCCGTTATTGGATTGGCAAAAGAGGTATTATGAATGGTTGATAAAATCTGGAAAAGAAGTGGAATTAATCGAATACCCAAATATGATTCATGTGTTTTTTTATTTTTCAAAATTGCCAGAAACGTCTCATTTTATTTCTAAAGTTAAGGATTTCATGACTAGACAGATGGCTAATGTAAGTTAG 999 0.4094 MTSNTTPLLPWKVRFTMSTISSLISASHRSNDTVNRRLFNFFDRKVPPNSNSKDGVSSSDVIVDPTRNLWFRLFTPSSNSVSDAPLPVFVFFHGGGFALSSPSSIVYNNICRLFCRSFPAIIVSVNYRLAPEHRFPSQYDDGLEILKFLDQNNNVLGKSADISKCFLSGDSAGGNIAHHVAVRIPLEKFQTLKIIGLVSIQPFFGGEKRTESEIRFKRAPTVSMDKTDWYWKMFLPYGSTRDHQVVNVSGPNAMDISNVDYPNTLLCVGGLDPLLDWQKRYYEWLIKSGKEVELIEYPNMIHVFFYFSKLPETSHFISKVKDFMTRQMANVS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03860 332 SUPERFAMILY alpha/beta-Hydrolases 56 326 IPR029058 -
Vifa1g03860 332 Pfam alpha/beta hydrolase fold 89 305 IPR013094 GO:0016787
Vifa1g03860 332 Gene3D alpha/beta hydrolase 1 325 IPR029058 -
Vifa1g03860 332 PANTHER ARYLACETAMIDE DEACETYLASE 53 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03860 Vifa-Chr1 595137133 595138131 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03860 29 316 Carbohydrate Esterase AT3G05120 38.870 1.65e-65 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03860 - - gmx:100799815 456.447