Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03855 ATGACCTCAACCACCACGCCACTCCTTCCATGGAAGGTTCGCTTCACCGTGTCTACCATCTCTTCCCTTATCTCCGCCTCTCACCGCTCCAACGACACCGTCAACCGCCGTCTCTTCAACTTTTTTGATAGAAAAACCTCTCCTAATTCTAACTCCATCGACGGAGTTTCTTCCTCCGACATCATCGTGGACCCCACACGTGATCTCTGGTTTCGCCTTTTCACTCCCTCCTCAAACTCCATGTCCGACGCATCACTCCCTGTCTTCGTGTTTTTTCATGGCGGCGGTTTTGCATTGTTTTCTCCGTCTTCCATCACATACAACGCAGTTTGTCGTTTATTCTGTCGTTCGTTTTCCGCAATCATTGTATCTGTTAATTACCGTCTTGCCCCCGAACATCGTTTTCCTTCTCAATATGAAGACGGTTTGGAAATTCTTAAATTCCTCGATCAAAATAACAGTGTCTTAGGAAAATCTGCTGACATCAGCAAATGTTTCCTGTCGGGTGATAGTGCGGGTGGAAATTTAGCCCATCATGTAGCGGTTCGGGTTTCTTTAGAAAAATTTGAAGTTTTGAAAGTTATTGGTTTGGTTTCAATACAACCGTTTTTTGGAGGTGAGGAAAGAACCGAATCTGAGATCCAGTTTAACCGGGTACCTATTGTTTCAATGGATAAAACTGATTGGTATTGGAAGATGTTTTTGCCGGATGGGTCAACCCGTGATCATGAAGCGGTTAATGTTAGTGGACCTAATGCAAAGGATATTTCAAATATTGATTATCCGAATACCCTTTTGTGTGTTGGTGGGTTAGACCCGTTACTGGATTGGCAAAAGAGATACTATGAGTGGTTGATAAAATCGGGAAAAACAGTAGAATTAATTGAATATCCAAATATGATTCATGTGTTCTATTATTTTCCAGAATTACCAGAGACGTCAGAGTTTATTTCTAGAGTTAAGGATTTCATGTATAAGCAAATGGCTTATATGAACTAA 999 0.4174 MTSTTTPLLPWKVRFTVSTISSLISASHRSNDTVNRRLFNFFDRKTSPNSNSIDGVSSSDIIVDPTRDLWFRLFTPSSNSMSDASLPVFVFFHGGGFALFSPSSITYNAVCRLFCRSFSAIIVSVNYRLAPEHRFPSQYEDGLEILKFLDQNNSVLGKSADISKCFLSGDSAGGNLAHHVAVRVSLEKFEVLKVIGLVSIQPFFGGEERTESEIQFNRVPIVSMDKTDWYWKMFLPDGSTRDHEAVNVSGPNAKDISNIDYPNTLLCVGGLDPLLDWQKRYYEWLIKSGKTVELIEYPNMIHVFYYFPELPETSEFISRVKDFMYKQMAYMN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03855 332 Gene3D alpha/beta hydrolase 2 331 IPR029058 -
Vifa1g03855 332 PANTHER ARYLACETAMIDE DEACETYLASE 44 305 - -
Vifa1g03855 332 Pfam alpha/beta hydrolase fold 89 305 IPR013094 GO:0016787
Vifa1g03855 332 SUPERFAMILY alpha/beta-Hydrolases 28 325 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03855 Vifa-Chr1 594392934 594393932 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03855 2 308 Carbohydrate Esterase AT3G05120 35.625 8.18e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03855 - - gmx:100799815 464.922