LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa1g03832	ATGGACCCTAACCAATATAATTTTCAACAATCTATACCACAAATAAATACTCATGGGATGAATTTTTCTCATCATGAACCCGAAACACCAAATGGGTTTATGTCCGAACGCCAAGTTCCACAATTTTCAACTCAAGTTGGTATTGAAAATAATACAATTGATAAAGAACAAAGGCGTCTAGTTAAAAGAAAACCTCGAGAGGTATTCACAAGGGAAGAAGATACACTTCTTATGCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAAGTCGATAGCTTTTGGTTAAGAATCACCGATAATTATAACCAATATCGTGGGCAGTCACGAGAAAAGCTACAAGGCAAATTAAAATCTCGATGGCATCGAATAAATAGCCTTGTTCAAAAATTTGTTGGGTGTTACAAACAAGTTGTTCATGGAAAAAAAAGTGGGGCATCAGAGAAAGATATCTTAGTCAATGCACATGCTTTTTTTGAACAAGATGAAGGTGCACCATTCAATCTTGAGTATGCACGGAGGCTTTTAAAAGATGAACCTAAATGGATGGGAGAATCCACTGAAAATTCTTCAAAGAGATCAAAGAATTCTACTAGTGGTGCATACACGGCATCGCCAAACTCAGAGACACCTTCAAGTTATGAGTTTAACTCATCATCTCCAATGGAGCGTCCTATGGGACAAAAGGCGGAAAAACAAAAAGGTAAGGCAAAGGAAAATACAAATGCAACTGAACCTCCTTCTAGTGTTAATTCTGATACAATGACTAAAAGAATGAATTTAATGGAAAATCAAGCACGGCTTAAGGAGGAAGAAAACAGATTAGTCAAGGAAAAGATGGAGTCTGAAGCACGACTTAAGGAGGAAGAAAACAAATTAATAAAGGAAAAGATGGAGTTTGAAGCAATGCAATTCATAATGTCAGACACTTTTAAGATGAATGATAGTCAGCGTGAATTTCATGAAAAACGGTGTAATAACCTAAAAGAAAAATATGGATGGTAA	1020	0.3608	MDPNQYNFQQSIPQINTHGMNFSHHEPETPNGFMSERQVPQFSTQVGIENNTIDKEQRRLVKRKPREVFTREEDTLLMQSWLNVSKDPIVGVDQKVDSFWLRITDNYNQYRGQSREKLQGKLKSRWHRINSLVQKFVGCYKQVVHGKKSGASEKDILVNAHAFFEQDEGAPFNLEYARRLLKDEPKWMGESTENSSKRSKNSTSGAYTASPNSETPSSYEFNSSSPMERPMGQKAEKQKGKAKENTNATEPPSSVNSDTMTKRMNLMENQARLKEEENRLVKEKMESEARLKEEENKLIKEKMEFEAMQFIMSDTFKMNDSQREFHEKRCNNLKEKYGW	339

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa1g03832	339	PANTHER	-	41	335	-	-
	Vifa1g03832	339	MobiDBLite	consensus disorder prediction	245	261	-	-
	Vifa1g03832	339	MobiDBLite	consensus disorder prediction	194	229	-	-
	Vifa1g03832	339	Pfam	No apical meristem-associated C-terminal domain	171	328	IPR029466	-
	Vifa1g03832	339	MobiDBLite	consensus disorder prediction	187	261	-	-
	Vifa1g03832	339	Coils	Coil	263	304	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa1g03832	Vifa-Chr1	590653353	590654488	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa1g03832	38	241	Glutathione S-transferase Gene Family	AT5G41240	32.273	1.95e-23	99.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa1g03832	-		-	cam:101493921	346.665