Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03762 ATGAACTCCAGAAAAGTGCTACTTTGGACCAATTTAAAACACCATTTTCCTTATATATTGATATTACAACAAATTGACTACAAAAAACAGCTTCTTCAATTAATCTCTTCTCTTTGTATACCTCTCTTCAAGTCTAGCTATAAGCCTCTAAGGAATAAACAGACTCATCAACAGAATCATAAGAAAATGAGAGAAACCATATCAGAAACATGTTTGGTTATGATCATTGTGATGTTGGTGACTGCATTATTTGCAAGACTAATTCAAATCAAGAAAAGCATATGGAGATTACCGCCCGGAAGGAGAGGTTGGCCTTTGATTGGTGACAGTATCAATTGGTACAATGCTGTTGCAAGTTCTCATCCTCCTCGGTTCGTTGAAGAAATGGCGCAAAGGTATGGTAAGATATTTTCTTGCAGCCTATTTGGAAAATGGGCAGTGGTGTCGTTGGATCCAAGTTTCAACCGTTTTGTAATGCAAAACGAAGGGAAATTATTCGTGTCAAGTTATCCGAAATCTTTTAGAGATTTGGTTGGTAAAAATGGTGTGATTACGGTTCAAGGAGATCAACAAAGGAAACTACATGGGATCGCGTCAAATATGATGCGGCTAGATAAGCTTAAGTTCCATTTCATGAATGATATACAAAATGTCATGATCCAAACTTTGAGCCATTTTAGCAACAATCAAGTCATTCTTCTCCAAGATGTCTGCAGAAAGGTAGCTATAAATTTAATGGTTAATCAACTATTAGGAGTTTCAAGTGAGTCTCAAGTCAATGAAATGGCTCAATTGTTTTCTGATTTTGTCGATGGTTGTTTATCCATTCCAATCAACATTCCTGGCTCTTCATACCACACTGCCATGAAGGCAAGGGAGAAGATCATAAGCAAGATAAACAAGATCATAGAGACATACAGAAAAAACGGTGCTGCAAAAGAAGGTACTAACAATGGTGTACTTGGAAGATTACTAGAGGAAGATAGCTTGCCAGATGAGGCTGTTGCAGACTTCATCATCAATCTTCTCTTTGCCGGCAACGAAACAACCACAAAAACAATGCTTTTTGCAGTTTATTTCCTTACTCAATGTCCTAGTGCCATGAAGGAACTTCTGGATGAACAAGATTCTCTAAGAACTGATTCTGGTGAAGAATTTCTCACATGGCAGGACTATAAAGCAATGCCATTTACTCAATGTGTTATTGATGAAACGCTTCGACTTGGAGGCATTGCAATTTGGTTAATGAGAGAAGCAAAAGAAGACATTCAATACCAAGATTTTGTTATTCCAAAAGGATGCTTTGTGGTTCCATTTCTTTCGGCGGTTCATTTAGACGAAAAGGTATATGAGGGAGCTACAAACTTCAATCCTTGGAGATGGACGGAACCTGAAAATGAAGAAAAGAGAAACTGGAGAACTAGTCCATTTTTTGCACCCTTTGGAGGAGGTGCTAGATTTTGTCCGGGAGCCGAGTTAGCTCGGCTTCAAATCGCTCTTTTTCTTCATTACTTTGTAACAAATTATAGATGGAAACAAATGAAGGAAGATCGAATGTCCTTCTTTCCGTCAGCTCGGTTAGTGAATGGCTTTGAAATTTGTTTAACAAGAAGACATGATGATAATCAAAGAAACTGA 1638 0.3785 MNSRKVLLWTNLKHHFPYILILQQIDYKKQLLQLISSLCIPLFKSSYKPLRNKQTHQQNHKKMRETISETCLVMIIVMLVTALFARLIQIKKSIWRLPPGRRGWPLIGDSINWYNAVASSHPPRFVEEMAQRYGKIFSCSLFGKWAVVSLDPSFNRFVMQNEGKLFVSSYPKSFRDLVGKNGVITVQGDQQRKLHGIASNMMRLDKLKFHFMNDIQNVMIQTLSHFSNNQVILLQDVCRKVAINLMVNQLLGVSSESQVNEMAQLFSDFVDGCLSIPINIPGSSYHTAMKAREKIISKINKIIETYRKNGAAKEGTNNGVLGRLLEEDSLPDEAVADFIINLLFAGNETTTKTMLFAVYFLTQCPSAMKELLDEQDSLRTDSGEEFLTWQDYKAMPFTQCVIDETLRLGGIAIWLMREAKEDIQYQDFVIPKGCFVVPFLSAVHLDEKVYEGATNFNPWRWTEPENEEKRNWRTSPFFAPFGGGARFCPGAELARLQIALFLHYFVTNYRWKQMKEDRMSFFPSARLVNGFEICLTRRHDDNQRN 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03762 545 Pfam Cytochrome P450 98 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03762 545 PANTHER CYTOCHROME P450 26 95 514 - -
Vifa1g03762 545 Gene3D Cytochrome P450 87 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03762 545 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Vifa1g03762 545 PRINTS E-class P450 group IV signature 336 362 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03762 545 PRINTS E-class P450 group IV signature 124 147 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03762 545 PRINTS E-class P450 group IV signature 444 462 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03762 545 PRINTS E-class P450 group IV signature 488 506 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03762 545 PRINTS E-class P450 group IV signature 395 411 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03762 545 PRINTS E-class P450 group IV signature 472 488 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03762 545 CDD CYP90-like 131 537 - -
Vifa1g03762 545 FunFam Cytochrome P450 720B1 family 87 538 - -
Vifa1g03762 545 SUPERFAMILY Cytochrome P450 95 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03762 545 PRINTS P450 superfamily signature 488 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03762 545 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03762 545 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03762 545 PRINTS P450 superfamily signature 400 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03762 Vifa-Chr1 581742839 581745752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03762 54 541 Cytochrome P450 AT1G73340 69.262 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03762 - - mtr:11414632 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03762 1 581742839 581745752 Vifa1g03762 1 581742839 581745752 ECH