Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03758 ATGAAGCTCTCATTAGGTCATTCAAATCAGCTAAGTACAATCGAGCTCTCCGCTTTCTTAAGCGCATGGTTGACAGGGGTTATAAACCTGATGCCATTCTCTGCCATTCTCTTCATCATCTTCCTCTCCATCTTTGATATTTCACTTTGTGGGGATCGAGATAAACCTGCTCTAATAACTTACCCAGATGTGGCTCTCAATTATGTGTCTTGTTTTCAGGGTCTGTTGTTTTGTCCAGAAGCAGCTTCTTTGATGCTTCGTAACTTCTGTATTTATCACATTGATGCTCCAGGGCATGAGTTGGGAGCTGATGTGATTTCTTCGGATGAACCGTTGCTTTGTGTGGATGACCTAGCTGATCAGGTTGCAGAAGTGCTTGATTTTTTCGGGCTAAGAGAGGTTATGTGCATGGGTGTAACAGCTGGTGCTTACATCCTCACACTATTTGCTATGAAATACAAAGAACGAGTGCTTGGATTGATTCTTGTTTCACCGATTTGTAAAGGACCTTCATGGACTGAATGGATTTACAACAAGGTCTTGATGAACTTATTGTACTTCTATGGTATGTGCGGTTTACTGAAGGAATGCCTCCTGCAACGTTACTTCAGTAAGGAGCTTAGATGCAGTATTGAGGGATCAGAATCAGAAGTAATACTAACTTGCCGAAGAAATATATTTGTTGCAGGAACAGACACAAGCACGTACACACTAGAATGGGCAATGGCAGAGTTAATGCACAATCCAAAAATCATGTCAAAAGTACAAAATGAACTCGAACAAGTTGTTGGCAAAGGTATTCCAGTCGAAGAAACAGACATAGCCAAATTACCATACATGCAAGCAGTTATAAAAGAGACGTTTCGTGTACATCCACCAGTTCCGTTATTACTACCTCGCAAAGCAGAAACAGATGTTGAAATTGGTGACTACATTATTCCAAAAGATGCACAAGTTTTGGTTAATGCTTGGGTTATTGGCAGAGATCCAAGTAAATGGGAGAATCCTAATGCTTTTGTGCCGGAGAGATTTTTCAATAGTGAGATTGATTTTAAAGGACATCATTTTGAGCTTATTCCATTTGGGTCTGGTAGAAGAATTTGTCCTGGTTTGCCTTTGGCTATTAGAATGTTGCCTTTGATGTTGGGATCTTTGGTTAATTGCTTTGATTGGAGACTTAAAGATGGATTGAATGTCGATGATTTGAATAAGGAAGATGAGTATGGGATTACCTTGGAAAAATCTCAACCTGTGAGAATTGTTCCAATCAAATTGACTAAGCAATAA 1287 0.397 MKLSLGHSNQLSTIELSAFLSAWLTGVINLMPFSAILFIIFLSIFDISLCGDRDKPALITYPDVALNYVSCFQGLLFCPEAASLMLRNFCIYHIDAPGHELGADVISSDEPLLCVDDLADQVAEVLDFFGLREVMCMGVTAGAYILTLFAMKYKERVLGLILVSPICKGPSWTEWIYNKVLMNLLYFYGMCGLLKECLLQRYFSKELRCSIEGSESEVILTCRRNIFVAGTDTSTYTLEWAMAELMHNPKIMSKVQNELEQVVGKGIPVEETDIAKLPYMQAVIKETFRVHPPVPLLLPRKAETDVEIGDYIIPKDAQVLVNAWVIGRDPSKWENPNAFVPERFFNSEIDFKGHHFELIPFGSGRRICPGLPLAIRMLPLMLGSLVNCFDWRLKDGLNVDDLNKEDEYGITLEKSQPVRIVPIKLTKQ 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03758 428 Gene3D alpha/beta hydrolase 70 195 IPR029058 -
Vifa1g03758 428 Pfam Cytochrome P450 215 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03758 428 Pfam Ndr family 47 226 IPR004142 -
Vifa1g03758 428 PRINTS P450 superfamily signature 359 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03758 428 PRINTS P450 superfamily signature 282 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03758 428 PRINTS P450 superfamily signature 229 246 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03758 428 SUPERFAMILY Cytochrome P450 217 421 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03758 428 FunFam Geraniol 8-hydroxylase 203 421 - -
Vifa1g03758 428 SUPERFAMILY alpha/beta-Hydrolases 82 216 IPR029058 -
Vifa1g03758 428 Gene3D Cytochrome P450 196 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03758 428 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 361 370 IPR017972 GO:0005506|GO:0016705
Vifa1g03758 428 PRINTS E-class P450 group I signature 238 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03758 428 PRINTS E-class P450 group I signature 322 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03758 428 PRINTS E-class P450 group I signature 368 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03758 428 PRINTS E-class P450 group I signature 218 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03758 428 PRINTS E-class P450 group I signature 281 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03758 428 PRINTS E-class P450 group I signature 358 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03758 428 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 218 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03758 Vifa-Chr1 581302644 581305004 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03758 212 424 Cytochrome P450 AT2G45550 55.300 4.71e-84 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03758 K18266 - gmx:100803300 346.665