Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03661 ATGTCTTCTTCTTCATCTTCTTCCTCATCCTCCTCTTCTTCCTCCTCCTCATCATCACAACCAAATGTTACTGCTCAAATCCAACCTTCTGCTCCTCCTGCCGATAACATTGACGCCCCTTCTTCCTCTCGTCAACGCTCCATGAATAATGAGGTTTGGCTTGAACCTGTTGTTGAAGCATTAGCCACTCAACTTGCCATTGATGCTTCTCATTTTCATGGCCGTCTTTCTGCCGCTTCTGCTCTCGCCATTATTTTTCAGGTTTGTTCAACATGGAGAGAAGTGTCGCGCTCGGATCTACTGTGGCAGAGGCTCACGAGACGCATCTGGCGCAGAACCTATAGATTGAGAGACACGTGGCAACTAGAGTACATCTATTGGCATCGAACGGCTAGGAACTTCACAACAGGTAGACACGCTTTAGTTGTCCCACAATACGATCCAGGAGATCCTCATCAAACCCTCATCTGCCGTTGTCTCACTCTCTCCGACACTCACCTTGCCTGCGGCTTTGTCGATGGCACGGTGCGCCTATTCGATCTCCTCACCGGCGTGCACATTACAACCTTCTGGTCGAATCATGGTCATCTATTTGGTCCGTTCTCACAATCCGTTTCGGGAATTGTAATTGCGAATTCCAACCTCGCAACTGTTGTGTTTGCGAGATTAGATGGAGATGTGTACGTCGCGATTATCAATGGATCTGAGATAATATCCGGGTCCATTGCAGCGCGACGTGCAATCTCTGGAGATGTTGTTAACAACGGAGTATTAGTGGAATTCGCGGGCTGTAGTCGTTGGTGGATTGGTTTATTCGCCGGTCACGCGGGCGGGGCTTTTCAAATATGGGACGCGCTAACAGAACAGCGCATGTTTGTTGGCGGTTCATTAACCGATCCAGAAACGGTTCAAGGATGGCATATGTTAACCGAGTTAGTCGAACCGGTGGGTCGAGTTAGGGTTACAGAAAGAGAGTTCGTTGTGGCTTGTACAAGTTCAAGATTGGTTTGTTTCAACTTAAGAAACCCAGAGGTTTTATTACGTGACGTGGGGTCCACCACAGGTTTTGTTGTTGGTTCGTTGGATGTTTGTCAAGAGGTTTTTGTTGTAGTGGAAAGAAACGGTGTTGGAACGGTTAGGCGCGTGGGTAGTTTTGAGCGCGTGAGTAGGCTTAGATTAAGAGGTTCTTGGTTGAGGGGTTTGTTGGGCGGCATGAATTTGGGGTATGTTATAACGTATTCTAGTGGGTCTGGTTTGTTGAGAGTTTGGGATATTCACGAGCCTGCGGCGCGGTTGTGTATCACGCTCGTTGTTAGAGATGATGGAGAAGGACAAGTTCATGGGAATAGTATGGTTGCAAATCAAACTCATGTGGCTATCTCATCTAATGACTCTTCAATACATTTACTGGATTTTAGTGTACAGTAA 1428 0.472 MSSSSSSSSSSSSSSSSSSQPNVTAQIQPSAPPADNIDAPSSSRQRSMNNEVWLEPVVEALATQLAIDASHFHGRLSAASALAIIFQVCSTWREVSRSDLLWQRLTRRIWRRTYRLRDTWQLEYIYWHRTARNFTTGRHALVVPQYDPGDPHQTLICRCLTLSDTHLACGFVDGTVRLFDLLTGVHITTFWSNHGHLFGPFSQSVSGIVIANSNLATVVFARLDGDVYVAIINGSEIISGSIAARRAISGDVVNNGVLVEFAGCSRWWIGLFAGHAGGAFQIWDALTEQRMFVGGSLTDPETVQGWHMLTELVEPVGRVRVTEREFVVACTSSRLVCFNLRNPEVLLRDVGSTTGFVVGSLDVCQEVFVVVERNGVGTVRRVGSFERVSRLRLRGSWLRGLLGGMNLGYVITYSSGSGLLRVWDIHEPAARLCITLVVRDDGEGQVHGNSMVANQTHVAISSNDSSIHLLDFSVQ 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03661 475 MobiDBLite consensus disorder prediction 1 45 - -
Vifa1g03661 475 SUPERFAMILY F-box domain 75 133 IPR036047 GO:0005515
Vifa1g03661 475 Gene3D - 152 475 IPR015943 GO:0005515
Vifa1g03661 475 PANTHER WD40 REPEAT PROTEIN 12, 37 9 454 - -
Vifa1g03661 475 SUPERFAMILY WD40 repeat-like 157 471 IPR036322 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Vifa1g03661 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03661 - - gmx:100807240 575.474