Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03625 ATGATATCCAACAACATATCCTCACCCTCACCCTCAAACCAAACCAACATTCAAATCTCTCCAGAACAAACTACCATCTCAAAAACACCCAAAAACTATCTTCCCTTCAGAACAAGATCATCAAGAAAGCTAGCAATTCTCAAAGTTGATGAACATCAAAAAACCAAACCAATAGTATGGTTTGCCGCAATACTATGTTTCATTTTCAGCCTCATGTTAATCTTCTTTGGCATAGCAACATTAATTTGCTACCTAGCCCTAAAACCAAGTAACCCTTCATTTGATATTCCAAATGCAAGCTTAAACCTAGTATATTTCGACTCAAAACCCTATCTCAATGGTGAGTTCACACTTCTCACAAATTTCTCAAACCCTAATAGAAGAGTTCATGTGAAGTTTGAGTCTTTACATATTGAACTTTTCTTCACAAATAGACTCATATCATCCCAATCGATTAATCCTTTCACTCAAAAGCCAAGAGAAACTAGGTTGCAAGCAGTGAAGTTTATGTCAAGTTTGCTTTTTGTGGCACAAGAGGTGGGTGTGAAACTTGTAGAGGAGGTGCAAAGTAGTAATAGGTTGAGTTATTATGCAAAGGGGACATTTAAGGTGAAGGTTAAAATGGGAATTATACATTTATCTTTCTGGCTTCATAGTTTTTGTCAGATGGAGATGACTGGTCCACCTGCTGGTTCTCTTGTTGCTAGACAATGTGTAACAACTCGATGA 729 0.3717 MISNNISSPSPSNQTNIQISPEQTTISKTPKNYLPFRTRSSRKLAILKVDEHQKTKPIVWFAAILCFIFSLMLIFFGIATLICYLALKPSNPSFDIPNASLNLVYFDSKPYLNGEFTLLTNFSNPNRRVHVKFESLHIELFFTNRLISSQSINPFTQKPRETRLQAVKFMSSLLFVAQEVGVKLVEEVQSSNRLSYYAKGTFKVKVKMGIIHLSFWLHSFCQMEMTGPPAGSLVARQCVTTR 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03625 242 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 21 229 - -
Vifa1g03625 242 MobiDBLite consensus disorder prediction 1 22 - -
Vifa1g03625 242 Pfam Late embryogenesis abundant protein 123 209 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03625 Vifa-Chr1 559854083 559854811 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03625 - - pvu:PHAVU_008G282100g 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03625 1 559854083 559854811 Vifa1g03625 1 559854083 559854811 ECH
Vifa1g03625 1 559854083 559854811 Vifa1g03625 1 559854083 559854811 PCT