Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03622 ATGTCTAATTCATCTCTTGATTATGAGCAGCAAATATATGGTAAGTTGCCAAATGATATCTCCGATAGGCATGTGTTACTGTGGGATCCTATCTTAGGCACAGGAACGGTGTATCAGAGTCCAATATTATATTTTCTTAACCCATTCTTGCCAGGCACCTCAAGAACTTTAAGTGGAAAATTTGTTTCTGTCTCCATCGAAGAAGTTGAAACCTTACTCCTGTGTCACAAAGCTCATCTTGAGCATTTTTGCAAGCAAACCGTAGCTACTGCGGCCGTCACTGTTTCTTCCACTGCATCAAACCCTTACTTCGGCTCCGTTACCTGA 327 0.419 MSNSSLDYEQQIYGKLPNDISDRHVLLWDPILGTGTVYQSPILYFLNPFLPGTSRTLSGKFVSVSIEEVETLLLCHKAHLEHFCKQTVATAAVTVSSTASNPYFGSVT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03622 108 SUPERFAMILY PRTase-like 8 36 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03622 Vifa-Chr1 559743064 559744361 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03622 9 35 PRT Gene Family AT4G26510 77.778 6.83e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03622 K00876 - gmx:100777904 50.447