Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03526 ATGGAATGGGTTTCAGGCATAATTTTCATCCTAGGGACACTTGGTTTGATAAGTGCTTGGAGGGTGTTGAATTGGGTGTGGCTGAAGCCAAAGAAGCTAGAGAAGCTGTTAAGAGAACAAGGACTTCATGGTAATTCATATAGGATCTTGGTTGGGGATATTAAGGATCTTTTTAAGATGGAAAAGGAAGCTAAATCCAAACCCATGAATCTCTCCGATGATATAATTCCACGTGTCAGTCCTTACATACAAAAGAGTATTAAAATTCATGGCAAGAATTCCTTTATTTGGTTTGGGACAAAACCTAGAGTGACACTCACAGAACCTGAGCAAATAAAAGATGTATTGAACAAGATCTCTGAATTTCCAAAGACAAGTTATAAAATTTTCAAGTTATTAGCTAGTGGTCTTGCTGGTTATCAGGGAGAAAAGTGGAGCAAACATAGAAAACTGATCAACCCTGCATTCCATTTAGAAAAATTGAAGATTATGACGCCAGCTTTCTTGGAAAGTTGCAATGATTTGATTAGAAAATGGGAAGAAGTGTTGTCTTCAGATGCGTCATGTGAAATAGACATATGGCCTTCACTTCAGAATCTGGCAAGTGATGCTATCTCTCGAGCAGCTTTCGGAAGTAGTTATGAAGAAGGAAAAAGAATATTTCAACTTCAAAGAGAGCAAGCTGAACATATAATAAAACTTGTAACAAAATCTATCATTCCATTATGGATGTTCCTACCTGCTATTGTACATAAAAGGATGAATGAAATTGACAAAGATATAAAGTCTTCGCTTAAAGATATAATTAACAAGAGGGAGAAAGCACTAAAGACAGGTGAATCTACTACGAACGACTTATTGAGTATTCTTCTTGAATCAAATCATAAGGAAATTGAAGAAAATGCAAACAACAAGAATGTGGGAATGAGTCTTGATGATGTAGTCGAGGAATGCAAGTTGTTCTACTTTGCAGGACAAGAAACTACTTCGGTTTTGCTTGTTTGGACAATGATATTGTTGAGTAGGTACCCTGATTGGCAACAACGTGCAAGGGAGGAGGTATTACAAATCTTTGGCAACAAAAAACCAGACTTTGATGGACTAAATAATTTGAAGATTGTTACCATGATTTTGTATGAGGTTCTTAGGTTATACCCTCCGGACAGTGAACTTTGGGGTGATGATGCTAAGATGTTCAATCCTGAGAGATTTTCCGAAGGAATTTCTAAAGCAACAAATGGTAGAGTTTCGTTTTTTCCATTTGGATGGGGTCCTAGAATTTGCATTGGACAAAACTTTTCCTTAATAGAAGCAAAGATGGCAATGACAATGATTTTGCAGCATTTCTCATTTCAACTTTCACCAACCTATGCTCATGCTCCATCCGCTTCCATTACTCTACAGCCACAATATGGTGCTCAAATTATTATACGTAAAGTCGAAACATAA 1449 0.3678 MEWVSGIIFILGTLGLISAWRVLNWVWLKPKKLEKLLREQGLHGNSYRILVGDIKDLFKMEKEAKSKPMNLSDDIIPRVSPYIQKSIKIHGKNSFIWFGTKPRVTLTEPEQIKDVLNKISEFPKTSYKIFKLLASGLAGYQGEKWSKHRKLINPAFHLEKLKIMTPAFLESCNDLIRKWEEVLSSDASCEIDIWPSLQNLASDAISRAAFGSSYEEGKRIFQLQREQAEHIIKLVTKSIIPLWMFLPAIVHKRMNEIDKDIKSSLKDIINKREKALKTGESTTNDLLSILLESNHKEIEENANNKNVGMSLDDVVEECKLFYFAGQETTSVLLVWTMILLSRYPDWQQRAREEVLQIFGNKKPDFDGLNNLKIVTMILYEVLRLYPPDSELWGDDAKMFNPERFSEGISKATNGRVSFFPFGWGPRICIGQNFSLIEAKMAMTMILQHFSFQLSPTYAHAPSASITLQPQYGAQIIIRKVET 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03526 482 Pfam Cytochrome P450 88 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03526 482 Pfam Cytochrome P450 388 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03526 482 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 387 - -
Vifa1g03526 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Vifa1g03526 482 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03526 482 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03526 482 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03526 482 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03526 482 CDD CYP72 81 476 - -
Vifa1g03526 482 SUPERFAMILY Cytochrome P450 78 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03526 482 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03526 482 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03526 482 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03526 482 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03526 482 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03526 482 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03526 482 Gene3D Cytochrome P450 388 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03526 482 Gene3D Cytochrome P450 59 387 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03526 Vifa-Chr1 546667515 546669571 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03526 20 480 Cytochrome P450 AT3G14690 52.918 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03526 - K23809 gmx:100808323 705.286