Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g03510 | ATGACGTTTATGAATAACATTAGAAGCGCTACGAAAGAAGCGTTGGATCGCACAGCGATAATCGCAAAGTTCTTATGTTGCCTTCACTTCACCGCCAACTACCTCTGTTCCCCAACTCACGCGTACGGACCTAGCATGCTCCCTACCCTAAACATCGCCGGCGATGTTCTTCTCGTCGAACACCTATCTCCGCGGATCGGGAAAGTTGGTCATGGTGACTTGGTTCTTGTTCGCTCGCCTTTGAACCCTAATCGGAACTTGACAAAACGTGTTGTTGCTATGGAAGGGGATACTGTTACTTTCTTTGATGCTTCGGGTTCCGATTCCTCCAGAACTGCTGTGGTGCCAAAGGGGCATGAAAAGTGTTTTTGCGGGTTTGGCCACCCAGTAGCTTTGGACTGCTTGATAATTGAAGATATTTTAATGAAGTGCTCCTTTAACTGCATCTAA | 450 | 0.4711 | MTFMNNIRSATKEALDRTAIIAKFLCCLHFTANYLCSPTHAYGPSMLPTLNIAGDVLLVEHLSPRIGKVGHGDLVLVRSPLNPNRNLTKRVVAMEGDTVTFFDASGSDSSRTAVVPKGHEKCFCGFGHPVALDCLIIEDILMKCSFNCI | 149 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g03510 | 149 | CDD | S26_SPase_I | 43 | 97 | IPR019533 | GO:0004252|GO:0006465 | |
Vifa1g03510 | 149 | Gene3D | Umud Fragment, subunit A | 32 | 124 | - | - | |
Vifa1g03510 | 149 | PANTHER | PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED | 4 | 119 | - | - | |
Vifa1g03510 | 149 | SUPERFAMILY | LexA/Signal peptidase | 34 | 102 | IPR036286 | - | |
Vifa1g03510 | 149 | Pfam | Signal peptidase, peptidase S26 | 21 | 102 | IPR019533 | GO:0004252|GO:0006465 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g03510 | Vifa-Chr1 | 545257737 | 545265361 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g03510 | 46 | 119 | MADS-box Gene Family | AT1G29960 | 52.000 | 9.38e-21 | 80.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g03510 | K09647 | - | cave:132173278 | 170.629 |