Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03472 ATGGAGCTTCACAGCCCTTTCTCTTGTACCTTCATAGCCACCTCCTTTCTTTTGCTCTTCATGATACTCAAAATAGTTAAAACTGGAAGGGTGAGTAGGGGAAAGACTAGATTTGAAAAACTTTGTAGAGATACTGATAGGATATTGCAAGATATCATCAAAGATCACAAAAGCAATTACAGAGATGAAGATCTAGTTGATGTTCTTCTCAAGTTACAACAGGATAATCATTTGACTGACGACAACATTAGAGCAGTCATCCAGGACTTGTTCAGTGCTGCTGGTATTGTTTCATGGGCGATGTCTGAGATGGTAAAGAATCCAAAGGTGATGGAAGAAGCACAAGCTGAGATAAGAAGAGTGTTTGATAAAAAAGGGTATGTAGATGAGTCAGAATTGCACCAATTGATATACTTAAGTTTATCATCAAAGAAACACTGA 441 0.3764 MELHSPFSCTFIATSFLLLFMILKIVKTGRVSRGKTRFEKLCRDTDRILQDIIKDHKSNYRDEDLVDVLLKLQQDNHLTDDNIRAVIQDLFSAAGIVSWAMSEMVKNPKVMEEAQAEIRRVFDKKGYVDESELHQLIYLSLSSKKH 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03472 146 Pfam Cytochrome P450 31 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03472 146 PANTHER OS08G0105600 PROTEIN 30 141 - -
Vifa1g03472 146 Gene3D Cytochrome P450 2 141 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03472 146 SUPERFAMILY Cytochrome P450 13 140 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03472 Vifa-Chr1 540336837 540338109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03472 30 145 Cytochrome P450 AT2G24180 36.641 2.08e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03472 - - lja:Lj5g3v2240830.1 135.961