Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03455 ATGGCCAAAGAGATTATGAAAACACAAGACCTCAACTTTTGTGATAGGCCAAACCTTATGTTGTCGACTATATTTGGTTATAATAATACTGATATTATATTCTCTATATATGGAGAACACTGGAGGCAACTACGAAAGATATGCGTTATAGAGCTATTGAGTGTAAAGCGTGTCCAGTCATTTAGGTCTATAAGAGAACAAGAGGTGGAAGACCTTGTTAAATCAATAACTGCAAGTGAAGGATCAATTGTTAATCTTTCTCGTAAGGTTTCCGATATGACATATGGGATAGTGGCGAGGGCGGCTTTTGGGAAAAGGAGTAAAAACGAACAAGCATTCAAATCAGCAACTGATGAAATAGCAGGTTTGTTGGGGGGGTTTTGTATTGCTGATTTATACCCATCTATTAAAATGCTTCAAAGGATGAGTATGGCCAAGACAAAATTGGAAAAACTTCACAGAGACATTGATAAGATAATGCAAGATATTCTCGAGGATCACAGGAGCATTCACAGGGGAGTATGGAAGGATGAAAATATAATGGATGCTCTTCTCAAGATTCAACAAGAAAATGAACAATCACAACATCCTGTGACTGACTTAAATATAAAATCAATCATTATGGACTTGTTTGCTGCTGGTACTCATACAACATCAGGAGTTATCTCATGGGGGATGTCTGAGATGGTAAAGAATCCAAAGGTAATGGAAGAAGCACAAGCTGAGGTAAGAAGAGTGTTTGATAAAAAAGGGTATGTAGATGAGAGAGAGATACATAAACTGATATACTTAAACTCTGTCATCAAAGAAACACTCAGGCTACATCCCATTGCACCAATGTTAGTTCCAAGAGAAAGTAGGGAGAGATGCCAAATAAATGGGTATGAGATCCCAGCAAAGACAAGGGTATTGGTCAATGCTTGGGCTATTGGAAGAGATCCAAAGTATTGGGTTGAAGCTGATAATTTTAAACCTGAGAGGTTTCTTAATAACCCAATTGATTTTAAAGGCATTGACTTTGAATTCATACCATTTGGTGCTGGAAGGAGGATTTGTCCAGGACTTGCATTTGCCTTACCGAGTATTGAGCTAACTATTGCTCAGTTACTTTACAACTTTAATTGGAAGCTTCCAAATGATATGAAGAATGAAGAACTAGATATGACTGAGTTATTTGGGATTACAGCAAGTAGAAAACATGACTTATGCTTGATTCCTATTATTCGCCGTCTTTGA 1236 0.3738 MAKEIMKTQDLNFCDRPNLMLSTIFGYNNTDIIFSIYGEHWRQLRKICVIELLSVKRVQSFRSIREQEVEDLVKSITASEGSIVNLSRKVSDMTYGIVARAAFGKRSKNEQAFKSATDEIAGLLGGFCIADLYPSIKMLQRMSMAKTKLEKLHRDIDKIMQDILEDHRSIHRGVWKDENIMDALLKIQQENEQSQHPVTDLNIKSIIMDLFAAGTHTTSGVISWGMSEMVKNPKVMEEAQAEVRRVFDKKGYVDEREIHKLIYLNSVIKETLRLHPIAPMLVPRESRERCQINGYEIPAKTRVLVNAWAIGRDPKYWVEADNFKPERFLNNPIDFKGIDFEFIPFGAGRRICPGLAFALPSIELTIAQLLYNFNWKLPNDMKNEELDMTELFGITASRKHDLCLIPIIRRL 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03455 411 CDD CYP71-like 1 402 - -
Vifa1g03455 411 Gene3D Cytochrome P450 1 410 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03455 411 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 345 354 IPR017972 GO:0005506|GO:0016705
Vifa1g03455 411 PRINTS P450 superfamily signature 213 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03455 411 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03455 411 PRINTS P450 superfamily signature 266 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03455 411 PRINTS P450 superfamily signature 343 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03455 411 PANTHER OS08G0105600 PROTEIN 1 407 - -
Vifa1g03455 411 Coils Coil 142 162 - -
Vifa1g03455 411 SUPERFAMILY Cytochrome P450 1 409 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03455 411 FunFam Cytochrome P450 99A2 1 407 - -
Vifa1g03455 411 PRINTS E-class P450 group I signature 342 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03455 411 PRINTS E-class P450 group I signature 306 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03455 411 PRINTS E-class P450 group I signature 1 19 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03455 411 PRINTS E-class P450 group I signature 202 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03455 411 PRINTS E-class P450 group I signature 352 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03455 411 PRINTS E-class P450 group I signature 93 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03455 411 PRINTS E-class P450 group I signature 222 248 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03455 411 PRINTS E-class P450 group I signature 265 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03455 411 Pfam Cytochrome P450 1 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03455 Vifa-Chr1 537961260 537962575 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03455 2 410 Cytochrome P450 AT3G26210 39.048 8.50e-107 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03455 - - mtr:11442302 639.417