Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03434 ATGGCTTCTTCCATCAAAATCTCTAGGCTCATTTCTCGGTCAATTTCTTCTGCGTCTTCTTCTACCTTGTTCTCTCGAGGTGGGAATGGCGGTTATCGGGGTGGATTACTTGCTAAATATAGCACAGCTGCTGTTGTTGATGAACAGCCGATTAAACCGTTGGTGCAAGTAGAGCATACTGGGCTCTTAATTGATGGAAAGTTTGTTGATGCTGCTTCTGGGAAAACATTTCCAACATTGGATCTGAGGACCGGGGAAGTGATTGCCCATGTTGCGGAGGGTCACTCTGAAGATATTGATAGGGCTGTTGCAGCTGCACGCAAAGCATTCGATATAGGCCCGTGGCCTAAGATGACAGCCTACGAAAGGCAAAAGATAATGTTGCGTGCTGCTGATCTGATTGAGAAACATAACGATGAGATTGTGACACTTGAGACTTGGGATAATGGGAAGCCGTATGAACAATCTCGTCAAGTTGAAATTCCAATGTTGGTTCGCCTAATTCGGTACTATGCTGGTTGGGAAGATAAGATTCATGGTCTCACAGTTCCAGCTGACGGAGCCTATCATGTGCAGACATTGCATGAACCGATTGCTGTTGCTGGTCAGATCATTCCATGGAACTTCCCTCTTCTCATGTTTTCTTAG 648 0.4552 MASSIKISRLISRSISSASSSTLFSRGGNGGYRGGLLAKYSTAAVVDEQPIKPLVQVEHTGLLIDGKFVDAASGKTFPTLDLRTGEVIAHVAEGHSEDIDRAVAAARKAFDIGPWPKMTAYERQKIMLRAADLIEKHNDEIVTLETWDNGKPYEQSRQVEIPMLVRLIRYYAGWEDKIHGLTVPADGAYHVQTLHEPIAVAGQIIPWNFPLLMFS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03434 215 Pfam Aldehyde dehydrogenase family 68 214 IPR015590 GO:0016491
Vifa1g03434 215 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 51 215 IPR016162 GO:0016491
Vifa1g03434 215 SUPERFAMILY ALDH-like 54 214 IPR016161 GO:0016491
Vifa1g03434 215 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 47 215 - -
Vifa1g03434 215 FunFam Aldehyde dehydrogenase, mitochondrial 49 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03434 Vifa-Chr1 535745392 535746039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03434 6 215 Aldehyde Dehydrogenase Gene Family AT3G48000 68.095 3.99e-104 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03434 K00128 - gmx:100777399 333.569