Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa1g03430 | ATGGTTGGGTTCCAGAGCGAGAATATGCCCGGGAACAACAAGTATAATGAATATAATAACTCTGGTGCTTCCTCTGTTGAACGATTCGTCGAAGGTGCTGCAGCAGCAGCAAAGGCTCTTAGTAATGGATATAAAAGGGAAGATGGAAAGCCTTTTAGACAACGGCTTTTGGTTGTGGCGAATAGACTGCCAGTTTCTGCTGTTAGGAAAGGTGAGGATTCTTGGTCATTAGAGATCAGTGCTGGCGGCTTGGTGAGTGCTCTTTTAGGTGTGAAGGAGTTTGAAGCGAGGTGGATAGGTTGGGCCGGGGTCAATGTGCCAGACGAGGTTGGACAGAAGACACTCACTGAAGCATTGGCTGAAAAGAGGTGTATCCCTGTATTTCTTACTGAAGAGATTGTTCATCAGTACTATAATGGCTATTGCAATAACATTTTGTGGCCCCTCTTTCATTATCTTGGACTTCCGCAAGAAGACCGTCTAGCAACAACTCGTGGTTTTCAATCTCAGTTTGAATCGTACCAAGTAGCAAACCAAATGTTTGCTGATGTTGTAAATGAGGTCTATGAAGAGGGAGATATTGTTTGGTGCCATGATTACCATCTTATGTTTCTACCACAATGCTTAAAGAAATTTAACAACAAAATGAAAGTTGGCTGGTTTCTCCATACCCCCTTTCCATCTTCTGAAATTCATAGGACTCTGCCATCTCGCACAGAGCTCCTCCGTGCAGTTCTTGCTGCTGACTTGGTTGGTTTTCACACCTATGATTATGCACGACACTTTGTTAGTGCATGTACTCGCATTCTCGGACTTGAGGCCACACCAGAAGGGGTTGAGGATCAAGGGAAAATGACTCGAGTTGCTGCATTTCCAATTGGTATAGACTCAGAACGATTTATACGGGCACTTGGCTCTTCTGAAGTTCAAGGTCCCATCAAAGACTTACAAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATTCCTCAAAAACTTCTAGCTTTTGAAAAGTTCTTGGAAGAGAATGTTGATTGGCGAGATAAAGTTGTTCTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCCGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGACGCATCAATGGCAGATTTGGATCACTGACTGCTGTTCCTATACATCACCTGGATCGCACTCTTGACTTTTATGGACTATGTGCTTTGTATGCAGTTACAGATGTAGCACTTGTCACGTCTTTGAGGGATGGAATGAATCTTGTCAGTTATGAGTTTGTGGCCTGCCAAGAAAAAAAGAAGGGGGTTCTCATTCTTAGTGAATTCGCTGGTGCTGCTCAATCTCTTGGTGCTGGGGCACTTCTGGTCAACCCCTGGAACATCACAAAAGTTGCTGAAGCAATTTCCAAAGCTCTGAACATGCCATCTGCAGAGAGAGAGAAGCGACACAGGCATAACTTTCATCATGTAACAACACACACTGCACAGGAGTGGGCAGAAACTTTTGTAAGTGAGCTTAATGATACTGTTGTTGAAGCACAACTGAGGACAAAGCAAGTTCCACCACGGCTCCCAGCTGACAAGGCAATTGAACAATATCTGACGTCAACCAATCGGCTACTTATTTTGGGATTCAATGGAACATTAACTGAACCAGTTGAGAGAAAAGGTGATCAGTTGAAAGAAATGGAACTCTCAGTGCATCCAGAACTGAAACTACCATTGACGAAACTTTGCAGTGACCCAAATACTACAGTTGTCGTGCTTAGTGGAAGTGATAGACAAATTCTAGATGAAAACTTTAAAGAATACGACACTTGGCTAGCAGCGGAGAATGGAATGTTTTTGAACTCTTCAAATGGAGAATGGATGACCACAATGCCAGAGCAACTGAATATGGAATGGGTTGACAGCGTGAAGCATATTTTTGAGTACTTCACTGAAAGAACACCTCGCTCACATTTTGAAGAAAGGGAAGCTTCACTTGTATGGAACTACAGACATGCAGATGTTGAGTTTGGAAAACTTCAAGCAAGGGACATGCTACAACATCTTTGCACAGGTCCAATTTCAAATGCATCAGTTGAAGTCGTTCAAGGGAGCCGATCAGTTGAGGTCCGAGCTGCTGGTGTTACAAAGGGAGCAGCTATTGACCGCATCCTGGGGGAGATAGTTCACTGTAAATCCATGACAACACCTATTGATTATGTTCTCTGTATAGGACATTTTCTGGCGAAGCAGGATGAAGATATATACGACTTTTTTGAGCCAGAGCCTTCCTGTTTTGGTGCGAGTCTTCAAAGAAGCAAGTTAACAGAAGCAGCTAAGTTTGCTAATGAGAAGGTATCACCTATGAAGATCCCATCGGGTAAAAATGGATTCAAGTCAACAAATCAAAACAAGGGACAACGACCTGTCTCAAATTCACCGAAGAAAACATCTAATATTTTCAGCCGAACAGTGCGGAAGCCAGCTCCCGAAAAGATCACTTGGAATGTCCTTGACCTCAAGAAGGAGAATTACTTCTCATGCGCTGTTGGTAGAACTCAAACAAATGCTCGCTTTACACTTCCGTCACCTGATGAAGTTGCTGAGTTTCTGAAGGAACTTGCTAATGCATCTTCTCATAATAACTGA | 2676 | 0.429 | MVGFQSENMPGNNKYNEYNNSGASSVERFVEGAAAAAKALSNGYKREDGKPFRQRLLVVANRLPVSAVRKGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKTLTEALAEKRCIPVFLTEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRGFQSQFESYQVANQMFADVVNEVYEEGDIVWCHDYHLMFLPQCLKKFNNKMKVGWFLHTPFPSSEIHRTLPSRTELLRAVLAADLVGFHTYDYARHFVSACTRILGLEATPEGVEDQGKMTRVAAFPIGIDSERFIRALGSSEVQGPIKDLQERFKGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENVDWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTAVPIHHLDRTLDFYGLCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGALLVNPWNITKVAEAISKALNMPSAEREKRHRHNFHHVTTHTAQEWAETFVSELNDTVVEAQLRTKQVPPRLPADKAIEQYLTSTNRLLILGFNGTLTEPVERKGDQLKEMELSVHPELKLPLTKLCSDPNTTVVVLSGSDRQILDENFKEYDTWLAAENGMFLNSSNGEWMTTMPEQLNMEWVDSVKHIFEYFTERTPRSHFEEREASLVWNYRHADVEFGKLQARDMLQHLCTGPISNASVEVVQGSRSVEVRAAGVTKGAAIDRILGEIVHCKSMTTPIDYVLCIGHFLAKQDEDIYDFFEPEPSCFGASLQRSKLTEAAKFANEKVSPMKIPSGKNGFKSTNQNKGQRPVSNSPKKTSNIFSRTVRKPAPEKITWNVLDLKKENYFSCAVGRTQTNARFTLPSPDEVAEFLKELANASSHNN | 891 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa1g03430 | 891 | NCBIfam | trehalose-phosphatase | 551 | 883 | IPR003337 | GO:0003824|GO:0005992 | |
| Vifa1g03430 | 891 | CDD | GT20_TPS | 55 | 520 | IPR001830 | GO:0003824|GO:0005992 | |
| Vifa1g03430 | 891 | MobiDBLite | consensus disorder prediction | 803 | 828 | - | - | |
| Vifa1g03430 | 891 | MobiDBLite | consensus disorder prediction | 800 | 828 | - | - | |
| Vifa1g03430 | 891 | Pfam | Glycosyltransferase family 20 | 55 | 520 | IPR001830 | GO:0003824|GO:0005992 | |
| Vifa1g03430 | 891 | Gene3D | - | 828 | 891 | IPR023214 | - | |
| Vifa1g03430 | 891 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 | 642 | 722 | - | - | |
| Vifa1g03430 | 891 | Pfam | Trehalose-phosphatase | 558 | 774 | IPR003337 | GO:0003824|GO:0005992 | |
| Vifa1g03430 | 891 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like | 302 | 504 | - | - | |
| Vifa1g03430 | 891 | SUPERFAMILY | HAD-like | 552 | 884 | IPR036412 | - |
Showing 1 to 10 of 19 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa1g03430 | K16055 | - | gmx:100789554 | 1464.13 |
Showing 1 to 1 of 1 entries