Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03429 ATGGAGCTTCACAGCAACTTTTCTAACTTTACCTTAATGGTTTCATTTCTCTTCCTCTTGATACTATTCAAAATAGTTACAAGATGGAGTACTTCTAAAAACTCTAACTCCAATTTACCACCAGGACCATGGACACTGCCCTTCATAGGGAACATACATCAGATTATTAGCAGCCCATTGCCTCATCATTCTTTCAAATTTTTGGCTGAAAAATATGGTCCTTTGATGCACCTAAAACTAGGAGAGGTACCATACATAATAGTTAGTTCACCAGAAATGGCCAAAGAGATTATGAAAACACATGACCTCACATGTTGTGATAGGCCAAACCTTATGTTGTCCACAATATTTAGTTACAATGCTACTGATATGATATTCTCTATACATGGAGAACACTGGAGGCAACTGAGAAAAATATGTGCCATAGAGCTATTCAGTGCAAAGCGTGTCCAATCATTTAAGTGCATAAGAGAAGAAGAGGTGTCAGATCTTGTTAAATCAATAGCTGCAAGTGAAGGATCTGTTGTTAATCTTACTCAGAAGATTTCCGATGTGACGCATGGGATAGTGGCGAGGGCAGCTTTTGGAAAAAAGAATAAACACGCACAAGCATTCAAATCAGCAATTGATGAAATAGTAAGTTTGATGGGAGGATTTTGTATTGCAGATTTGTATCCATCTATTAAAATGTTTCAAAGGACGAGTACCGCGAAGAAGAAATTTGAAAAACTTCATAGAGAGATTGATATGATAATGCAAGATATTGTCGACGATCACAAAAATATTCATAGGGAAGTAAGCAAGGATGAAGATCTAGTAGATGCTCTTCTCAAGATTCAACAAGAAAATGAAAACTCACAACATCGCGTGACTGACGTAAACGTGAAATCAATCATTCTGGACATATTTGGTGCTGGTACTGAAACAACCTCAGGAATTAAGTCATGGTGTATGTCTGAGATGGTAAAGAATCCAAAGGTATTGGAAGAAGCACAAGCTGAAGTAAGAAGAGTGTTTGATAAAAAAGGGTATGTAGATGAGAGAGAGATACATAAACTGATATACTTAAACTCTGTCATCAAAGAAACACTCAGGCTACATCCCATTGTACCAATGTTAGTTCCAAGAGAAAGTAAGGAGAGATGCCAAATCAATGGGTATGAGATCCCAGCTAAGACAAGGTTCATGGTCAATGCTTGGGCTATAGGTAGAGATCCAAGGTATTGGGTTGAAGCTGAGAGTTTTAAACCTGAGAGGTTTCTTAATAGCCCAATTGATTTCAAAGGCACAGACTTTGAATTCATACCATTTGGTGCTGGAAGGAGGATTTGTCCAGGCATTGCATTTGCCTTACCGAGTATTGAGCTAACTATTGCTCAGTTACTTTACAACTTTAATTGGAAGCTTCCAAATAATATGAAGAATGAAGAACTAGATATGACTGAGTCATTTGGGATTTCAGCAAGAATAAAACATGACCTATGCTTAATTCCTATTGTTCGTCGTCTTTGA 1512 0.3743 MELHSNFSNFTLMVSFLFLLILFKIVTRWSTSKNSNSNLPPGPWTLPFIGNIHQIISSPLPHHSFKFLAEKYGPLMHLKLGEVPYIIVSSPEMAKEIMKTHDLTCCDRPNLMLSTIFSYNATDMIFSIHGEHWRQLRKICAIELFSAKRVQSFKCIREEEVSDLVKSIAASEGSVVNLTQKISDVTHGIVARAAFGKKNKHAQAFKSAIDEIVSLMGGFCIADLYPSIKMFQRTSTAKKKFEKLHREIDMIMQDIVDDHKNIHREVSKDEDLVDALLKIQQENENSQHRVTDVNVKSIILDIFGAGTETTSGIKSWCMSEMVKNPKVLEEAQAEVRRVFDKKGYVDEREIHKLIYLNSVIKETLRLHPIVPMLVPRESKERCQINGYEIPAKTRFMVNAWAIGRDPRYWVEAESFKPERFLNSPIDFKGTDFEFIPFGAGRRICPGIAFALPSIELTIAQLLYNFNWKLPNNMKNEELDMTESFGISARIKHDLCLIPIVRRL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03429 503 CDD CYP71-like 71 494 - -
Vifa1g03429 503 Pfam Cytochrome P450 40 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03429 503 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03429 503 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03429 503 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03429 503 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03429 503 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03429 503 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03429 503 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03429 503 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03429 503 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03429 503 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03429 503 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03429 503 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03429 503 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03429 503 PANTHER CYTOCHROME P450 71B11-RELATED 20 499 - -
Vifa1g03429 503 FunFam Cytochrome P450 99A2 29 499 - -
Vifa1g03429 503 SUPERFAMILY Cytochrome P450 40 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03429 503 Gene3D Cytochrome P450 31 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g03429 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03429 Vifa-Chr1 535137720 535139322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03429 8 500 Cytochrome P450 AT5G25120 40.200 3.11e-133 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03429 - - mtr:11442302 774.622