Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03417 ATGCAAGCCTTATGGCTTTCCTTGAAGGACAATGTCAAATGTGGAAACAAACTCACTGATGTAATAAAGCTACCACCAAAATTTGGCAAAGGAAATAGCTTTGTGCTACAAAAGGAAGAGAAAATAAACAAAGATGAAGAAGAAGAAAGCTTCCCCTTCATGAAAACTCCAGCGAGGATACTTGTTTCCAAGCCAAACAACGCACAGGCTCGACTTTACGAGCTTGGGATTGGAGATCCATCGAGAAAAATTGTCGAGATGATATTTCAGAAAGCATCAATGAACACATTGAAGCATTCAAGGAAGGTTAGAACAGTTCTAAGGGTGAGATATTCGGAACATGTTCTTGAAAGATTTGAGAAATACAGAGAAGAAGTGAAGAAACAATATCCAAAGCATCCAAGAAGCACAGTAGATGGAAATGAATTGTTGAGATTCTATGTCACTACAATGAGATGCTTCCAAGGGAAGAAAGTTCATGATCTTTGTGAAGATTCGTCGTGTTGTTTTTGTCAAATAATTCAGTTCAACTTCGACACAGAACAGACTGAGATTCAGTTGAATATAAGTGACAGAAAAAGTGTCAATGCAAGAGTGAAGAATGTGAAAAGAGTTTCAATAGTTTGTAGAGTAATTGCTGGAAGTTCAGTGAATGAAGTTGATGGTGAATATGAACAAGGGTTTGAGAATGAAATGCAATTTAGCTTAGAAAGATTTGTAGTGAAAAATCCATGTTCTATTCTTCCTTGTTTTGTCATAATTTTTAGTTGA 771 0.3619 MQALWLSLKDNVKCGNKLTDVIKLPPKFGKGNSFVLQKEEKINKDEEEESFPFMKTPARILVSKPNNAQARLYELGIGDPSRKIVEMIFQKASMNTLKHSRKVRTVLRVRYSEHVLERFEKYREEVKKQYPKHPRSTVDGNELLRFYVTTMRCFQGKKVHDLCEDSSCCFCQIIQFNFDTEQTEIQLNISDRKSVNARVKNVKRVSIVCRVIAGSSVNEVDGEYEQGFENEMQFSLERFVVKNPCSILPCFVIIFS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03417 256 SUPERFAMILY ADP-ribosylation 72 256 - -
Vifa1g03417 256 Gene3D - 70 256 - -
Vifa1g03417 256 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 68 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03417 Vifa-Chr1 531640354 531641190 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03417 72 254 C2H2 Transcription Factor Family AT5G54630 34.562 1.01e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03417 - - tpra:123921169 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03417 1 531640354 531641190 Vifa1g03417 1 531640354 531641190 ECH