Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g03386 | ATGAACACTTCCTCTCAGTTTTTCTTCCTTTCACTCATTGCCGTATGGCTCATATCTCTAACAGCTTTTGGAGCTACTACAGTTCACCCGGACGAAAAGAAAGCTCTTGAAGATATAGCTATATCACTTGGTAAGAAGGACTGGAACTTCGACATAGATCCATGCAGCAACGAACCTAACTGGTTTACGCCTCCCATACCCAAAATCTTAGAGAACAATGTTACCTGTAATTGCTCTGTCCCTGGTGAGAACTTCTGTCATGTTACTATAATAAGTTTGAAAGGGCAAAATCTTCAAGGCACTCTCCCACGAGAACTGAACAGGTTGCAATACCTTCAAACTATTGACCTCTCTCGCAATTACTTGAACGGTACAATTCCTAAAGAATGGGGCTCCATGACGAATCTTCTTAACATTAATCTCCTTGGAAATCGGTTAACGGGTTCAATACCAAAGGAGATTGCAAATATATCAACCCTGATTCAGTTGGAGTTAACGGCCAATCAAATGTCTGGAAATATTACTTCTGAGCTTGGGAATCTACCTCAGATTCGAACACTGCGATTTTCTTCTAACAATTTTTCTGGAGAGCTACCTGCGACATTGGCCAAGCTCACTACATTGCAAGATTTCCAAATTTCCGACAACCTATTCTCGGGAAAGATACCCGATTTTATTCAAAACTGGACTAATATCAATACGCTAATCATTCAAGGGAGTGGATTAAGTGGACCAATTCCTTCCAAAATTTCACTTTTGAGAAACTTAACTGACTTGAGAATTAGTGATTTAAATGGATCTGAATATGCATCTTTACCACAAGTTAATAATATGACATCGTTAAGCAAACTGGTTCTAAGGAATTGCAACATCAATGGAACACTACCTGATCTCAGGACTATGACATCATTAAAATACTTAGACTTCAGCTTTAACAAATTAAGTGGAACAATTCCAAGTACCTATGCCGACATAAACAATATTATGAACTTCATATTTTTAACTGGAAACCTTCTCACTGGACCGATACCTCTTTGGAAAACGAACCTCTACGTAGATCTTTCATACAATAACTTCAGCATCAGCCAAGGGAATCAGATATGTCAAAATGATAAAGTAAACTTGTTTTCTACCTCATGGTCAAACAATAACATAGGAACAGTTTCATGTTTGAGGGAATGTACCAAACCCTCCTACTCCCTTTATATAAATTGTGGCGGACAGCAAGAAACAGTTAACAAAAAAAGTTATAATGGGGATTCAGATTCACCTGGACCAGCTAAATTCCATGTCAGTCCAACAGGAAATTGGGCATTTAGCACCACTGGTATATTCATTGATGGAGACCAACTCGGAGAAACTTATTCCCCGCAAAATGTTACTACACTTACTATGGCAGATGCTGATTTGTACATGAATGCACGTGGTTCTGCCATTTCTTTGACTTATTATGGGTTTTGCCTGGCAAATGGAAGCTACACAGTAAATCTACATTTTGCTGAAATAATGTTCAGAGACGACCAAACTTATGGTAGTCTTGGAAGACGTGTATTTGATATCTACCTTCAGGGAAAGCCAGTGCAAAAGGACTTCAATATTGCCAAAGAAGCAGGAGGAGTTGGTAAGGAAGTCATAAAACCGTTCAAAGATGTTGTTGTTACAAGTAATACCTTGGAGATCCGTTTGTATTGGGCTGGAAAAGGAACACAGTCTCTCCCAAATAGATCAGTATTTGGTCCTCTTATATCTGCCATATCAGTGGAATCTGACTCTCCGCCTGGAAGCATATCTGCAGGAGCTGTGGTTGGAATTGTGGTTGCAGCAACAGTTATTATCATTCTAGTATTTGGTATACTTTGGTGGAAAGGATGTTTTGGAAAAAAAAACTCATTAGAAAGAGACTTGAAGAGTTTAGACGTTCGAACGGGTATATTTACCTTACGACAAATCAAAGCAGCCACAAATAACTTTGATATTTCCAATAAGATTGGAGAAGGCGGATTTGGTCCTGTTTACAAGGGATGTTTACCCAATGGGACATTGATAGCAGTAAAGCAACTTTCTTCTAAATCAAAGCAAGGGAATCGTGAGTTCTTAAATGAAATAGGCATGATATCTGCTTTGCAACATCCTTATCTTGTTAAACTCCATGGTTGTTGTGTGGAGGGAGATCAGTTGTTGCTGATATATGAATACTTGGAAAACAATAGTTTAGCTCGTGCTTTATTTGGTCCAGAGGAACACCAAATAAAATTAGATTGGTCAACAAGGCAGAAGATTTGTGTTGGTATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGACTGAAGGTTGTTCACAGGGACATCAAGGCCACTAATGTATTGCTTGATACGAATCTTCACCCAAAGATATCTGATTTTGGTTTGGCCAAGCTTGATGAGGAGGACAATACTCACATTAGTACTAGAATTGCCGGGACCTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACGGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCTTTGGAAGTCGTTAGTGGAAGGAACAACACCCTTCATCGGGCAAAGGAGGAAGCATTCTATCTTCTTGATTGGGCACATTTGTTGAAAGAGAGGGGTGATCTAATGGAGCTAGTTGATAGAAGATTAGGTTCAAATTTCAACAAAAAGGAAGCTATGGTGATGATCAATGTGGCTCTCCTATGCACAAATGTCACTTCAAACCTTAGACCCTCCATGTCGTCGGTGGTAAGTTTCCTTGAAGGAAGGAACGCGGTACCAGAATTTGTTTCAGATTCAAGTGAAGTAATGGATGAAAAGAAGTTGGAAGTAATGAGGCAGTATTACTACCAGAAGGAAGAAAATAAGATAAGTAGTACGTCTCAAACACAAAGTCAGAGTTTAATAAGTGATGGGCCATGGACCGCTTCATCTTCATCAGCTGTAGACCTTTATCCTGCCCACCTTGATTCTTCCTATTTGGAGGGAAGAAATTAA | 3021 | 0.3923 | MNTSSQFFFLSLIAVWLISLTAFGATTVHPDEKKALEDIAISLGKKDWNFDIDPCSNEPNWFTPPIPKILENNVTCNCSVPGENFCHVTIISLKGQNLQGTLPRELNRLQYLQTIDLSRNYLNGTIPKEWGSMTNLLNINLLGNRLTGSIPKEIANISTLIQLELTANQMSGNITSELGNLPQIRTLRFSSNNFSGELPATLAKLTTLQDFQISDNLFSGKIPDFIQNWTNINTLIIQGSGLSGPIPSKISLLRNLTDLRISDLNGSEYASLPQVNNMTSLSKLVLRNCNINGTLPDLRTMTSLKYLDFSFNKLSGTIPSTYADINNIMNFIFLTGNLLTGPIPLWKTNLYVDLSYNNFSISQGNQICQNDKVNLFSTSWSNNNIGTVSCLRECTKPSYSLYINCGGQQETVNKKSYNGDSDSPGPAKFHVSPTGNWAFSTTGIFIDGDQLGETYSPQNVTTLTMADADLYMNARGSAISLTYYGFCLANGSYTVNLHFAEIMFRDDQTYGSLGRRVFDIYLQGKPVQKDFNIAKEAGGVGKEVIKPFKDVVVTSNTLEIRLYWAGKGTQSLPNRSVFGPLISAISVESDSPPGSISAGAVVGIVVAATVIIILVFGILWWKGCFGKKNSLERDLKSLDVRTGIFTLRQIKAATNNFDISNKIGEGGFGPVYKGCLPNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLHGCCVEGDQLLLIYEYLENNSLARALFGPEEHQIKLDWSTRQKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDTNLHPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEVVSGRNNTLHRAKEEAFYLLDWAHLLKERGDLMELVDRRLGSNFNKKEAMVMINVALLCTNVTSNLRPSMSSVVSFLEGRNAVPEFVSDSSEVMDEKKLEVMRQYYYQKEENKISSTSQTQSQSLISDGPWTASSSSAVDLYPAHLDSSYLEGRN | 1006 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g03386 | 1006 | Pfam | Malectin domain | 400 | 585 | IPR021720 | - | |
Vifa1g03386 | 1006 | Gene3D | Phosphorylase Kinase; domain 1 | 626 | 732 | - | - | |
Vifa1g03386 | 1006 | CDD | STKc_IRAK | 663 | 930 | - | - | |
Vifa1g03386 | 1006 | FunFam | probable LRR receptor-like serine/threonine-protein kinase At1g53430 | 626 | 732 | - | - | |
Vifa1g03386 | 1006 | Gene3D | Ribonuclease Inhibitor | 28 | 267 | IPR032675 | - | |
Vifa1g03386 | 1006 | Gene3D | Ribonuclease Inhibitor | 268 | 380 | IPR032675 | - | |
Vifa1g03386 | 1006 | FunFam | Probable LRR receptor-like serine/threonine-protein kinase RFK1 | 34 | 198 | - | - | |
Vifa1g03386 | 1006 | SUPERFAMILY | L domain-like | 54 | 405 | - | - | |
Vifa1g03386 | 1006 | Pfam | Protein tyrosine and serine/threonine kinase | 659 | 928 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa1g03386 | 1006 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase isoform A | 199 | 265 | - | - | |
Vifa1g03386 | 1006 | FunFam | Putative leucine-rich repeat receptor-like serine/threonine-protein kinase | 398 | 590 | - | - | |
Vifa1g03386 | 1006 | SUPERFAMILY | Protein kinase-like (PK-like) | 640 | 942 | IPR011009 | - | |
Vifa1g03386 | 1006 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 17 | 968 | - | - | |
Vifa1g03386 | 1006 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 733 | 940 | - | - | |
Vifa1g03386 | 1006 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 779 | 791 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa1g03386 | 1006 | Gene3D | Transferase(Phosphotransferase) domain 1 | 733 | 942 | - | - | |
Vifa1g03386 | 1006 | ProSiteProfiles | Protein kinase domain profile. | 657 | 977 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g03386 | 1006 | Gene3D | - | 398 | 590 | - | - | |
Vifa1g03386 | 1006 | SMART | serkin_6 | 657 | 928 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g03386 | Vifa-Chr1 | 528363459 | 528373024 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g03386 | 25 | 957 | Receptor kinase-like Gene Family | AT1G53420 | 54.805 | 0.0 | 987 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vifa1g03386 | PK_Tyr_Ser-Thr | 2.7e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g03386 | - | - | gmx:732563 | 1313.13 |