Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g03373 | ATGGCTACGCTTCTTCCTTCTTCCCTCACAAACCCAAATAAACTCTTCCACAATGTATCACTTTCCACTTCACCCTCTTCTCTAACAACCACTTCAGTTTCTCTTTACCCTAAAACGCGACGTTTTGGTCGTCGTTTTGGGTCCGTTAGATGCTGTTTAGCTTATGTCGATAACGCTAAGATTAAGGTCGTGGGAATTGGGGGTGGTGGTAACAATGCCGTTAACCGCATGATTGGTAGTGGTTTGCAGGGTGTAGATTTCTATGCGATAAATACGGATGCTCAAGCGCTACTGCATTCTGCAGCCGAGAATCCTATTAAAATTGGAGAGCTTCTGACTCGAGGATTAGGTACTGGTGGGAATCCGCTTTTGGGGGAACAAGCTGCGGAGGAATCGAAAGAGGCTATTGCTAATGCCCTTAAAGGATCGGATTTGGTGTTTATAACAGCTGGGATGGGTGGGGGTACAGGGTCCGGCGCTGCACCTGTTGTGGCTCAAATATCAAAAGAGGCAGGTTACTTGACCGTCGGTGTTGTTACCTATCCTTTCAGTTTTGAAGGAAGGAAAAGATCCTTGCAGGCACTTGAAGCCATTGAAAAGCTTCAGAAAAATGTTGATACCCTTATTGTAATTCCAAATGACCGTCTGCTTGACATAGCCGACGAGCAGATGCCTCTCCAGGATGCTTTTCGTCTAGCGGATGATGTTTTACGCCAAGGAGTTCAGGGAATTTCAGACATTATAACAATACCTGGACTTGTAAATGTGGATTTTGCTGATGTAAAAGCCGTGATGAAAGACTCTGGTACTGCAATGCTCGGAGTAGGTGTTTCATCCGGTAAAAACCGAGCAGAAGAAGCAGCTGAACAGGCTACTTTGGCTCCTTTAATTGGATCATCTATTCAATCAGCCACAGGAGTAGTGTATAACATTACTGGAGGAAAGGACATCACCCTGCAGGAAGTCAACAGGGTATCTCAGGTTGTGACTAGTTTGGCCGATCCTTCTGCCAATATTATATTTGGAGCTGTTGTAGATGATCGTTACACCGGAGAGATTCACGTGACTATCATCGCCACTGGCTTTTCGCAATCTTTTCAGAAGAAGCTGCTAACAGATCCAAGGGCTGCAAAGCTTCTTGACAAAGTGGCCGAGGGAAAAGAAAGCAAGACAGTGCCTCCTCCCCTCAAGTCCTCAAACTTATCTTCCAAAGTTGAATCTAGAGCACCACCCCCACGAAAGCTCTTTTTTTAG | 1254 | 0.4553 | MATLLPSSLTNPNKLFHNVSLSTSPSSLTTTSVSLYPKTRRFGRRFGSVRCCLAYVDNAKIKVVGIGGGGNNAVNRMIGSGLQGVDFYAINTDAQALLHSAAENPIKIGELLTRGLGTGGNPLLGEQAAEESKEAIANALKGSDLVFITAGMGGGTGSGAAPVVAQISKEAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDIADEQMPLQDAFRLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSGKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYTGEIHVTIIATGFSQSFQKKLLTDPRAAKLLDKVAEGKESKTVPPPLKSSNLSSKVESRAPPPRKLFF | 417 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g03373 | 417 | ProSitePatterns | FtsZ protein signature 1. | 91 | 125 | IPR020805 | GO:0005525 | |
Vifa1g03373 | 417 | NCBIfam | cell division protein FtsZ | 57 | 371 | IPR000158 | GO:0003924|GO:0005525 | |
Vifa1g03373 | 417 | SMART | Tubulin_4 | 60 | 252 | IPR003008 | GO:0005525 | |
Vifa1g03373 | 417 | Pfam | Tubulin/FtsZ family, GTPase domain | 60 | 220 | IPR003008 | GO:0005525 | |
Vifa1g03373 | 417 | SUPERFAMILY | Tubulin C-terminal domain-like | 254 | 370 | IPR008280 | - | |
Vifa1g03373 | 417 | ProSitePatterns | FtsZ protein signature 2. | 144 | 165 | IPR020805 | GO:0005525 | |
Vifa1g03373 | 417 | Pfam | FtsZ family, C-terminal domain | 269 | 362 | IPR024757 | - | |
Vifa1g03373 | 417 | Hamap | Cell division protein FtsZ [ftsZ]. | 56 | 386 | IPR000158 | GO:0003924|GO:0005525 | |
Vifa1g03373 | 417 | MobiDBLite | consensus disorder prediction | 384 | 417 | - | - | |
Vifa1g03373 | 417 | SUPERFAMILY | Tubulin nucleotide-binding domain-like | 59 | 255 | IPR036525 | - | |
Vifa1g03373 | 417 | Gene3D | Tubulin/FtsZ, GTPase domain | 54 | 267 | IPR036525 | - | |
Vifa1g03373 | 417 | PANTHER | CELL DIVISION PROTEIN FTSZ-RELATED | 56 | 375 | IPR045061 | GO:0003924|GO:0005525 | |
Vifa1g03373 | 417 | SMART | Tubulin_C_4 | 254 | 371 | IPR018316 | - | |
Vifa1g03373 | 417 | ProSitePatterns | Tubulin subunits alpha, beta, and gamma signature. | 153 | 159 | IPR017975 | GO:0005525|GO:0005874|GO:0007017 | |
Vifa1g03373 | 417 | Gene3D | - | 268 | 374 | IPR037103 | - | |
Vifa1g03373 | 417 | FunFam | Cell division protein FtsZ 1, chloroplastic | 225 | 362 | - | - | |
Vifa1g03373 | 417 | CDD | FtsZ_type1 | 73 | 361 | IPR000158 | GO:0003924|GO:0005525 | |
Vifa1g03373 | 417 | PRINTS | Cell division protein FtsZ signature | 236 | 258 | IPR003008 | GO:0005525 | |
Vifa1g03373 | 417 | PRINTS | Cell division protein FtsZ signature | 145 | 165 | IPR003008 | GO:0005525 | |
Vifa1g03373 | 417 | PRINTS | Cell division protein FtsZ signature | 173 | 194 | IPR003008 | GO:0005525 | |
Vifa1g03373 | 417 | PRINTS | Cell division protein FtsZ signature | 259 | 280 | IPR003008 | GO:0005525 | |
Vifa1g03373 | 417 | FunFam | Cell division protein FtsZ 1, chloroplastic | 53 | 267 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g03373 | Vifa-Chr1 | 527492063 | 527494193 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g03373 | 148 | 356 | PP2C-type Phosphatase Gene Family | AT1G75010 | 21.461 | 8.89e-06 | 46.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g03373 | K03531 | - | gmx:100808722 | 665.611 |