Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03347 ATGACGTCAGGAACGAGGCTGCCCACATGGAAGGAGAGAGAAAACAACAAGAGGAGAGAGAGAAGAAGAAGAGCTATAGCTGCTAAGATCTTCTCTGGTTTGAGAATGTATGGTAACTTTAGATTGCCAAAACATTGCGATAATAATGAAGTTCTTAAAGCTCTTTGTAATCAAGCTGGTTGGACTGTTGAACCTGATGGAACCACTTACCGTAAGGGATGCAAACCTTTAGAGCACATGGATATAATTGGCGGATCATCGGCTGCAAGCCCTTGCTCATCTTACCATCCAAGCCCTGGCTCATCATCCTTCCCAAGTCCATCTTCATCTCCTTACGGTACAAACCATAACCCCGATGGTAATTCCCTCATTCCATGGCTCAAAAACCTCTCCACAGCTTCATCTTCAGCATCATCTCCAAAACTTCCACATCCCTACCTTCATAGCAGCTCCATCAGCGCTCCAGTCACACCTCCCTTGAGCTCTCCGACTTCTAGAACACTGCAAATGAATACTACTGACTGGGAAGATCCGTCTGCACGGCCGGGATGGAGTGGACAACATTATTCTTTCCTGCCTTCTTCCGGTCCTCCAAGCCCCGGCCGTCAGATAGTTGATCCTGAATGGTTTGCAGGGATCAAACTTCCTCATGCTAGTCCAACTTCCCCAACATTCAACCTTGTCTCTCGAAATCCATTTGCTTTCAAGGAAGATGGTTTTTCGGGCAGTGGTTCGCGCATGTGGACCCCTAGACAGAGTGGAACGTGTTCTCCGGCTATTGCAGCTGGCTCGGATTACAATGCTGACATTCCTATGTCAGAAGCCATCTCAGATGAATTTGCATTTGGAAGCAACACATTTGGGATTGTGAAGCCTTGGGAAGGAGAAAGGATCCATGAAGAATTTGTAACAGATGATCTTGAACTTACACTTGGTAACTCAAAGACCAGGTGA 954 0.4665 MTSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNFRLPKHCDNNEVLKALCNQAGWTVEPDGTTYRKGCKPLEHMDIIGGSSAASPCSSYHPSPGSSSFPSPSSSPYGTNHNPDGNSLIPWLKNLSTASSSASSPKLPHPYLHSSSISAPVTPPLSSPTSRTLQMNTTDWEDPSARPGWSGQHYSFLPSSGPPSPGRQIVDPEWFAGIKLPHASPTSPTFNLVSRNPFAFKEDGFSGSGSRMWTPRQSGTCSPAIAAGSDYNADIPMSEAISDEFAFGSNTFGIVKPWEGERIHEEFVTDDLELTLGNSKTR 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03347 317 MobiDBLite consensus disorder prediction 1 21 - -
Vifa1g03347 317 MobiDBLite consensus disorder prediction 88 117 - -
Vifa1g03347 317 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 131 IPR008540 -
Vifa1g03347 317 MobiDBLite consensus disorder prediction 149 182 - -
Vifa1g03347 317 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 317 IPR033264 GO:0003700|GO:0006351|GO:0009742
Vifa1g03347 317 MobiDBLite consensus disorder prediction 149 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03347 Vifa-Chr1 521928251 521929947 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03347 1 317 BZR Transcription Factor Family AT1G78700 65.672 6.69e-120 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vifa1g03347 BES1_N 2.8e-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03347 - - gmx:100795369 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03347 1 521928251 521929947 Vifa1g03347 1 521928251 521929947 ECH