Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03339 ATGTCGTCTTCAGAGATTCTCCAACAACTTGAATCTCTGAAGGAAGAAAAGACCAAAATCGACCACAAAATTTCACTTCTCGAAGCTCAATTGAAGGAAATTAATCTCCAAAACGCCGCTGCTGCATCACCCAATGGCTCTTTACGGTATCCTACAAATGGATTAGAACCGCACATGATTCATAGATACAGTCGGCATCTTGTTCTTCCTTCATTTGGTGTTCAAGGACAAGCAAATTTGTTGAAGTCGTCAATTTTAGTTGTGGGAGCTGGAGGACTGGGTGCTTCTGCATTGTTATATTTTGCAGCTGCTGGTGTTGGTAAATTGGGTGTTCTCGATCATGACAAGGTTGAGTTGAATAATATGCATAGACAGATTATACACACGGAAGCATATATTGGTCAGCCAAAAGTGAAATCTGCTGCTGCTGCTTGTCGCTCGATCAACTCATCTATTGAAGTTGTGGAACATGAAGAAGCTTTGAAGAATTCCAATGCTTTGGAAATTTTCAGCAAATACGATATAATAGTGGATGCAACAGATAATGCTCCCACCCGATATTTGATCAATGACTGCTGCGTGGTACTAGGAAAGCCCCTTGTATCAGGTGCGGCTGTGGGATTGGAAGGACAGCTCACTATCTACAATCACAACGGTGGTCCTTGCTTTCGATGCCTCTTTCCAACCCCACCACCTAGAGCAGCATGCCAAAGTTGTGCCGATGGTGGAGTACTTGGAGTAGTTCCTGGTATAATTGGCTGTCTCCAAGCTCTTGAGGCGATTAAGATTGCTGCTTCTGTTGGTGAACCACTCTCTGGAAGGATGCTTCTCTTAGATGCATTGGCTGCACGGATCCGTATTGTTAAAATCAGAGGAAGGTCTTTGCAATGTGAAGCTTGTGGAGAAAATGCAATAATGAATCAGCAGTACTTTAGAGAATTTGATTATGAGAAGTTCACTCAAACTCCCTTGTCTGAGGCTCCGTTGAAGTTAAATCTACTTCCCAGTGAGTCTAGAATCAGCAGCAAGAAGTACAACGAAATCATTCTCAACAAGGAACCACATGTTCTTGTCGATGTTAGACCAGCTCATCATTTCAAGATTGTGTCTCTTCCAAATTCCGTCAACATTCCGTTCGCAGATATAGAGTTTAGGTTGCCTGAAATATCATCAATTTTGAAGAAAGATGAAGGGGAAAAAAGTGCAGAATTGTATGTTGTATGCAGAAGGGGAAATGATTCTCAAAGGGCTGTTCAATACCTTCACAAAATGGGATTTGCTTCTGCTAAGGATATTGTTGGAGGTTTGGAGTCTTGGGCTAAAAATGTTGATCCTAACTTCCCCACTTATTAG 1353 0.4205 MSSSEILQQLESLKEEKTKIDHKISLLEAQLKEINLQNAAAASPNGSLRYPTNGLEPHMIHRYSRHLVLPSFGVQGQANLLKSSILVVGAGGLGASALLYFAAAGVGKLGVLDHDKVELNNMHRQIIHTEAYIGQPKVKSAAAACRSINSSIEVVEHEEALKNSNALEIFSKYDIIVDATDNAPTRYLINDCCVVLGKPLVSGAAVGLEGQLTIYNHNGGPCFRCLFPTPPPRAACQSCADGGVLGVVPGIIGCLQALEAIKIAASVGEPLSGRMLLLDALAARIRIVKIRGRSLQCEACGENAIMNQQYFREFDYEKFTQTPLSEAPLKLNLLPSESRISSKKYNEIILNKEPHVLVDVRPAHHFKIVSLPNSVNIPFADIEFRLPEISSILKKDEGEKSAELYVVCRRGNDSQRAVQYLHKMGFASAKDIVGGLESWAKNVDPNFPTY 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03339 450 Gene3D - 338 450 IPR036873 -
Vifa1g03339 450 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 58 417 IPR035985 GO:0008641
Vifa1g03339 450 CDD RHOD_ThiF 331 450 - -
Vifa1g03339 450 Pfam Rhodanese-like domain 346 441 IPR001763 -
Vifa1g03339 450 ProSiteProfiles Rhodanese domain profile. 351 448 IPR001763 -
Vifa1g03339 450 SMART rhod_4 341 445 IPR001763 -
Vifa1g03339 450 FunFam Adenylyltransferase and sulfurtransferase MOCS3 56 305 - -
Vifa1g03339 450 Gene3D - 57 307 - -
Vifa1g03339 450 CDD ThiF_MoeB_HesA_family 62 290 - -
Vifa1g03339 450 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 27 450 IPR028885 GO:0002143|GO:0004792|GO:0005829
Vifa1g03339 450 Pfam ThiF family 63 298 IPR000594 -
Vifa1g03339 450 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 59 314 IPR045886 -
Vifa1g03339 450 Coils Coil 10 30 - -
Vifa1g03339 450 FunFam Adenylyltransferase and sulfurtransferase MOCS3 338 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03339 Vifa-Chr1 520335886 520339923 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03339 101 450 Sulfurtransferasese or Rhodanese AT5G55130 70.588 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03339 K11996 - gmx:100814736 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03339 1 520335886 520339923 Vifa1g03339 1 520335886 520339923 ECH