Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03298 ATGTCTTCCGAAACTCAAAATTCACAGAGGATATTGAGATGGGTTCAAGAAGAGGAAGAACGTGTAAGAGAAAATAACAGAAATGCATTGAAGTGCATAATTTTAGACATGACAGTTGTTACAACAATAGACACAAGTGGACTTGAAACTTTAGGTGAACTTAGAAAGATGCTGGAAAAGAGATCACTTCAGTTTGTGTTGGTAAATTCTGTTGGAAATGTGATGGAAAAGTTAGATATGTCGAAGATTTTGGATACCTTTGGACTTAAAGGATTATATCTCACTGTAGGAGAAGCTTTGGCTGATATATCGACATCAGAGAAAGATGAACCTTGTCTGATATTTCTAGACTATACCCGTCATCTATTATTTCCGTTTTGGTTAACATGTAACAAATTTTTGGTTCTGAAATCTTAA 417 0.3453 MSSETQNSQRILRWVQEEEERVRENNRNALKCIILDMTVVTTIDTSGLETLGELRKMLEKRSLQFVLVNSVGNVMEKLDMSKILDTFGLKGLYLTVGEALADISTSEKDEPCLIFLDYTRHLLFPFWLTCNKFLVLKS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03298 138 CDD STAS_SulP_like_sulfate_transporter 30 96 - -
Vifa1g03298 138 PANTHER SULFATE TRANSPORTER 8 104 IPR001902 GO:0016020|GO:0055085
Vifa1g03298 138 SUPERFAMILY SpoIIaa-like 26 102 IPR036513 -
Vifa1g03298 138 Gene3D STAS domain 2 110 IPR036513 -
Vifa1g03298 138 ProSiteProfiles STAS domain profile. 1 103 IPR002645 -
Vifa1g03298 138 Pfam STAS domain 9 99 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03298 Vifa-Chr1 513702715 513704140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03298 2 108 Inorganic Solute Cotransporters AT3G15990 63.551 3.10e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03298 K17471 - gmx:100780331 146.362