Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03259 ATGACAACATCCACCTTCGCCCAATTCTACGCCTCCTGGTACGACCAATTCACCCGCTTAATCAACCAACTCACAACACCACCAAACCAAACCGACACACAGGAACAAATCCGCAAGGTCATGTCCCACCACGAAGACTACTTCAACGCTAAATCAACCGCTGCTGAAAAAGATCCTCTCCACGTCTTAGCATCTCCTTGGGCCACCACACTTGAACAATCCCTTCACTGGATCGCAGGGTGGAGACCCACCACAGCTTTTCACCTCATCTACACTGAATCATCTCTTCTCTTTGAGTCTCACATTATCGACATCCTTCGTGGACTAAGAACCGGTGACCTCGGTGATCTCTCACCGACTCAGTTCCGCCGTGTTAGCGACTTGCAATGTGACACCGAAGAGAATGCCATAACGGAGGAGTTATCAGAGTGGCAAGACAGTGCAACCGATATGATGGGTTCGGAGGCTGAAATCAATGATAAGATACAACGCCTGGTGGGCATTATAAAGAAAGCGGATGAGCTACGGCTGAGGACGCTGCGGAGTGTGGTGGAGTTTCTGTCGCCGCAGCAGGCTATTGAGTTCTTGATTGCTTCAGCTGAGTTGCTGGTTGGGATACGTGGTTGGGGATTGAATCACGACCGTTCACTTCCTAGGATATGA 663 0.5008 MTTSTFAQFYASWYDQFTRLINQLTTPPNQTDTQEQIRKVMSHHEDYFNAKSTAAEKDPLHVLASPWATTLEQSLHWIAGWRPTTAFHLIYTESSLLFESHIIDILRGLRTGDLGDLSPTQFRRVSDLQCDTEENAITEELSEWQDSATDMMGSEAEINDKIQRLVGIIKKADELRLRTLRSVVEFLSPQQAIEFLIASAELLVGIRGWGLNHDRSLPRI 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03259 220 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 5 216 - -
Vifa1g03259 220 ProSiteProfiles DOG1 domain profile. 3 216 IPR025422 GO:0006351|GO:0043565
Vifa1g03259 220 Pfam Seed dormancy control 20 92 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03259 Vifa-Chr1 508241636 508242410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03259 5 198 bZIP Transcription Factor Family AT5G06950 23.963 1.81e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03259 - - gmx:778192 310.457