Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03182 ATGTTTGTGTTTCTGTGTTTGGTTTTATTTTTTCCGTTGCTGTACTACAATGGAGGTGTGGTTATGGCTTCGAGTGAGAGCAGTAGCGGTTCGAAAAACCTTGATCAGACACCAACGTGGGCTGTTGCTTGTGTTTGTACTATTTTCATCTTGATTTCGATTGTTCTTGAGAAGAGTCTTCACAAAATTGGAATGTGGCTGGGAGAAAGACAGAAGAAGGCTTTGCTTGAAGCTTTGGAAAAGGTCAAAGCAGAATTGATGATTTTGGGCTTCATTTCATTGCTTTTGACTTTTGGGCAGTCCTTCATTATTAAAATTTGTATTCCTGCAAATGTTTCGCACACATTGTTGCCATGTTTGTATGATAGATCCCAACATGGAAATAACAAAGAGGAACATCGTAGGAAACTTCTCTTTCATGAACACAGATATTTATCGGAAGATGCTAGCCCTGTCCAATGCAAGGAGGGTAAAGAGCCCCTTATATCTGCCAATGGATTGCACCAGATACACATCCTCATATTCTTCTTAGCAGTCCTTCATGTTCTATATAGTGCAGTCACAATGCTTCTCGGGAGACTAAAGATACGAGGATGGAAGGCATGGGAGGCAGAGACATCGTCTCATGGATATGAGTTTGCTACTGATCCTTCAAGATTCCGGCTTACACACGAAACATCGTTTGTTAGACAACACGCCACTTTTTGGACAAAAAATCCCATCTTCTTTATTATAAGTTGCTTCTTTAGACAGTTTTATAGATCTGTTGATAAGGCTGACTATTTGACTCTGCGCAATGGATTTATCGCTGTTCACCTATCACCAGGAAGTAAATTTAACTTCCAAAAATATATCAAAAGATCCTTAGAGGATGATTTCAAGGTAGTTGTCGGAGTCAGTCCGGTCCTTTGGGCATCATTTGTTGTTTTCCTGCTCCTAAATGTTGATGGATGGCATGCTATAGTTTGGGCATCCTTGATTCCCGTTGTCATAATTTTGGCGGTTGGAACTAAACTTCAAGCTACATTGACAAAGATGGCTATTGAAATCACAGAAAGACATGCAGTTATCCAAGGGATTCCTCTTGTTCAAGGCTCCGACAAATATTTTTGGTTTGGCCGGCCTCAATTACTTCTTCATCTTATCCATTTTTCCCTGTTTCAGAATGCCTTTCAAATAACATATATCTTGTGGATATGGTACTCTTTTGGGCAGGACAATTGTTTCCATGCTGATAAAAGTATTGCAATAGTCAAAGTAGTCTTAGGTTACATAACTCTTCCATTATATGCTCTAGTTATTCAGATGGGATCAAGAATGAAAAAGTCAATATTTGATGAACAAACATCAAAAGCCTTAAAAAAATGGCACAATACTGTGAAAAAGAAGCACGGACGCAAACAAGGAAAGTCGAGTGTGCGAACCATGGGCGGAAGCACCACGGATTCCACTGTGCACTCTATTAGCCCTATACTACACCGTTACAAAACCACCGGTCACTCAACTCGCGTTGATTCAGTCTATGATGATGACCGAGATGATTCCCATTCTGATATTGAATTGTCTCCAACGTCACCACGATCAAATTTGCTAGCAGTAAGAGTAGATCATGTTGAGCAAGATGCAAAAGAAAATGAACACCAAACTATCATAGAAACCATTGAACAACAACACCAAACTATCATAGAAACCATTGAACAAAAGCCGACGATAAGAGGTAGCATTTCTTTTGTCAAGCCTGATCATCCGGGAAAAAACACGAATTAA 1767 0.3967 MFVFLCLVLFFPLLYYNGGVVMASSESSSGSKNLDQTPTWAVACVCTIFILISIVLEKSLHKIGMWLGERQKKALLEALEKVKAELMILGFISLLLTFGQSFIIKICIPANVSHTLLPCLYDRSQHGNNKEEHRRKLLFHEHRYLSEDASPVQCKEGKEPLISANGLHQIHILIFFLAVLHVLYSAVTMLLGRLKIRGWKAWEAETSSHGYEFATDPSRFRLTHETSFVRQHATFWTKNPIFFIISCFFRQFYRSVDKADYLTLRNGFIAVHLSPGSKFNFQKYIKRSLEDDFKVVVGVSPVLWASFVVFLLLNVDGWHAIVWASLIPVVIILAVGTKLQATLTKMAIEITERHAVIQGIPLVQGSDKYFWFGRPQLLLHLIHFSLFQNAFQITYILWIWYSFGQDNCFHADKSIAIVKVVLGYITLPLYALVIQMGSRMKKSIFDEQTSKALKKWHNTVKKKHGRKQGKSSVRTMGGSTTDSTVHSISPILHRYKTTGHSTRVDSVYDDDRDDSHSDIELSPTSPRSNLLAVRVDHVEQDAKENEHQTIIETIEQQHQTIIETIEQKPTIRGSISFVKPDHPGKNTN 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03182 588 MobiDBLite consensus disorder prediction 503 525 - -
Vifa1g03182 588 MobiDBLite consensus disorder prediction 459 485 - -
Vifa1g03182 588 MobiDBLite consensus disorder prediction 503 520 - -
Vifa1g03182 588 PANTHER MLO-LIKE PROTEIN 1 31 512 IPR004326 GO:0006952|GO:0016020
Vifa1g03182 588 Pfam Mlo family 32 492 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03182 Vifa-Chr1 498319827 498324052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03182 20 555 MLO family AT2G17480 62.319 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03182 K08472 - gmx:100788020 833.172