Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g03179 | ATGGATTCCAATAAGCTTCAGTCTCGCTTCTGTCTAGTCAGACAATCCTCTCGGGCAACGGACCGTGAAAATTCCGGTACCGTCGACGTGCCGGAAACGGTAGCGTTGAATCCGACGGTTCGATTGATGTATTTATCAAACGAAGGCGACTTGGAAGCAATCAACGTGCTTTTAGACGACGGATGTGACGTCAATTACCGAGACAATGACGGCCGCACCGCTCTCCATATCGCGGCATGTCAAGGCCGAACTGATGTTGTCCAGTTGTTGATTCAAAGAGGTGCTGAAGTTGATCCGCAAGATCGTTGGTGCAGCACTCCTCTTGCTGATGCGTTGTACTACAAAAATCATGATGTTGTCAAGCTTTTGGAGCAACATGGTGCAAAACCCCCGGTGGCTCCTATGCATGTCCAGGATGCCCGTGAAGTCCCTGAATATGAGATTGATTCATCTGAACTTGATTTTACAAATAGTGTTTGCATAACAAAGGGAACTTTCCGGAGTGCATTATGGGGTGGAATTCAAGTAGCTGTTAAAACTCTTGGGGAGGAAGTATTCACTGACGATGACAAAGTAAAGGCATTTCACGACGAGCTTACGTTACTTCAGAAAGCAAGGCATCCAAATGTTGTCCAATTTTTGGGTGCCGTGACACAAAGCACCCCAATGATGATTGTCACAGAATATCTACCCCAGGGGGATCTTCGAGCCTACTTAAAGAGGAAAGGTGCATTAAAACCATCTACAGTTGTGAAGCTTGCACTAGATATTGCTAGGGGAATGAACTATTTGCATGAACACAAGCCTGATCCCATAATACACCGAGATCTTGAGCCTTCAAATATTCTCCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTCACTCAAAATCACTAAAACAGTCAAAGAAGACAAACCTGTGACATGCCAGGATACATCATGGCGGTATGTTGCACCTGAGGTTTACCGAAATGAGGAATATGACACCAAAGTGGATGTGTTTTCTTTTGCTTTGATATTACAAGAGATGATTGAAGGTTGTCCACCATTTTATAGAAAGCCAGAAAATGAAGTTCCTAAAGCATATGTGGAAAATGAGCGGCCACCGTTTAGGGCATCACCAAAGCTTTATGCTAATGGATTAAAAGAGTTAATTGAGGAATGTTGGGATGAAGAACCATACAAAAGACCAACATTTAACAAAATAATACAGAGGTTGGATAATATCAACCATCATCTTGCTCAGAAGAGGCGTTGGAAGGCTTTGACTCCTTCATGCATATGGAGTTTGGACGCCTTGTTTAAGGGATATCCTAGAAATCATGATAGCCGATCAGCTCGCTCTACGGTTAGATAA | 1374 | 0.4367 | MDSNKLQSRFCLVRQSSRATDRENSGTVDVPETVALNPTVRLMYLSNEGDLEAINVLLDDGCDVNYRDNDGRTALHIAACQGRTDVVQLLIQRGAEVDPQDRWCSTPLADALYYKNHDVVKLLEQHGAKPPVAPMHVQDAREVPEYEIDSSELDFTNSVCITKGTFRSALWGGIQVAVKTLGEEVFTDDDKVKAFHDELTLLQKARHPNVVQFLGAVTQSTPMMIVTEYLPQGDLRAYLKRKGALKPSTVVKLALDIARGMNYLHEHKPDPIIHRDLEPSNILRDDSGHLKVADFGVSKSLKITKTVKEDKPVTCQDTSWRYVAPEVYRNEEYDTKVDVFSFALILQEMIEGCPPFYRKPENEVPKAYVENERPPFRASPKLYANGLKELIEECWDEEPYKRPTFNKIIQRLDNINHHLAQKRRWKALTPSCIWSLDALFKGYPRNHDSRSARSTVR | 457 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g03179 | 457 | Gene3D | - | 4 | 144 | IPR036770 | - | |
Vifa1g03179 | 457 | ProSiteProfiles | Ankyrin repeat region circular profile. | 70 | 102 | - | - | |
Vifa1g03179 | 457 | Pfam | Ankyrin repeats (3 copies) | 42 | 130 | IPR002110 | GO:0005515 | |
Vifa1g03179 | 457 | PRINTS | Ankyrin repeat signature | 71 | 86 | IPR002110 | GO:0005515 | |
Vifa1g03179 | 457 | PRINTS | Ankyrin repeat signature | 119 | 133 | IPR002110 | GO:0005515 | |
Vifa1g03179 | 457 | PIRSF | ILK | 3 | 434 | - | - | |
Vifa1g03179 | 457 | PRINTS | Tyrosine kinase catalytic domain signature | 227 | 240 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa1g03179 | 457 | PRINTS | Tyrosine kinase catalytic domain signature | 383 | 405 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa1g03179 | 457 | PRINTS | Tyrosine kinase catalytic domain signature | 266 | 284 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa1g03179 | 457 | PRINTS | Tyrosine kinase catalytic domain signature | 337 | 359 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa1g03179 | 457 | SUPERFAMILY | Protein kinase-like (PK-like) | 161 | 412 | IPR011009 | - | |
Vifa1g03179 | 457 | Pfam | Protein tyrosine and serine/threonine kinase | 171 | 412 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa1g03179 | 457 | SMART | ANK_2a | 36 | 66 | IPR002110 | GO:0005515 | |
Vifa1g03179 | 457 | SMART | ANK_2a | 103 | 132 | IPR002110 | GO:0005515 | |
Vifa1g03179 | 457 | SMART | ANK_2a | 70 | 99 | IPR002110 | GO:0005515 | |
Vifa1g03179 | 457 | FunFam | serine/threonine-protein kinase STY46-like | 148 | 231 | - | - | |
Vifa1g03179 | 457 | CDD | STKc_MAP3K-like | 161 | 412 | - | - | |
Vifa1g03179 | 457 | Gene3D | Transferase(Phosphotransferase) domain 1 | 150 | 421 | - | - | |
Vifa1g03179 | 457 | SUPERFAMILY | Ankyrin repeat | 41 | 133 | IPR036770 | - | |
Vifa1g03179 | 457 | ProSiteProfiles | Ankyrin repeat profile. | 70 | 102 | IPR002110 | GO:0005515 | |
Vifa1g03179 | 457 | ProSiteProfiles | Ankyrin repeat profile. | 37 | 69 | IPR002110 | GO:0005515 | |
Vifa1g03179 | 457 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 107 | 420 | - | - | |
Vifa1g03179 | 457 | FunFam | Integrin-linked protein kinase family | 19 | 146 | - | - | |
Vifa1g03179 | 457 | ProSiteProfiles | Protein kinase domain profile. | 155 | 420 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g03179 | 457 | FunFam | Os01g0748600 protein | 141 | 432 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g03179 | Vifa-Chr1 | 497580659 | 497585295 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g03179 | 1 | 426 | MAP Kinase Kinase Kinase | AT4G18950 | 65.197 | 0.0 | 568 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-5 | Vifa1g03179 | PK_Tyr_Ser-Thr | 2.5e-55 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g03179 | - | - | gmx:100795964 | 739.569 |