Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03149 ATGGAAGAAGAAACCATGGATACAACCATACCATCATTTCTCACTCAAAACATGAACTCTACTACCACTTCTCAGGGAGTTCAAAAGTCTCTGCATGTTTTACGGAGAAGCCGAAGACGGTGCACCGAGGAGAAACTCATGTTGATAAAGGAAGTTGCTGTTGAGGAGAAAGAAAAGGATGAAGATGAAGATGAAGAAAGTGATGATAGAGAAGAGATAGAGAGAAAGATTAATGCATTGCAGAGGATTGTACCTAACGGTGAGTCTTATGGTGTGGACAAGCTTTTTGATGAAACTGCTGGATATATTCTTGCTTTACAGTATCAAGTCAAAGCTTTGAAAGCTCTTACTGGTTTCTTTCAAAAGATGGAGAAAGACAACACTAAACTTGGTGGTTAA 399 0.391 MEEETMDTTIPSFLTQNMNSTTTSQGVQKSLHVLRRSRRRCTEEKLMLIKEVAVEEKEKDEDEDEESDDREEIERKINALQRIVPNGESYGVDKLFDETAGYILALQYQVKALKALTGFFQKMEKDNTKLGG 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03149 132 MobiDBLite consensus disorder prediction 54 73 - -
Vifa1g03149 132 CDD bHLH_AtIBH1_like 75 117 IPR044549 GO:0006355
Vifa1g03149 132 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 34 120 IPR044660 GO:0006355
Vifa1g03149 132 Coils Coil 63 83 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03149 30 117 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 31.461 7.65e-08 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03149 - - mtr:11429968 166.777