Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03099 ATGTCAGTGATAGCCGTGGAAAAGCTGATAGCAAAATTGAAAAAAGGAATTAGCGGAAGCAATTCAAATTCTATCAAGGAATTTGTGACGAATGAGGCCCTTGGCCCTAATATGAATAGGCCAAAGCAGTCCAAAACTGTGCTCATTATGGATGAAGTTGATGGGATGTCAGCTGGTGATAGGGGTGGTGTTGCTGATCTTATTGCTAGCATCAAGATATCAAAATTTCCCATTATCTGCATTTGCAATGACCGTTACAGCCAGAAATTAAAAAGCCTAGTGAACTACTGTTTGCTTCTTAGTTACCGGAAGCCTACAAAGCAACAGATGGCAAAGAAGTTTATGGAGGTTGCAAAGGCTGAAAGGCTTCAAGTTAATGAGATTGCTCTTGAGGAATTAGCAGAAAGGATATGA 414 0.4034 MSVIAVEKLIAKLKKGISGSNSNSIKEFVTNEALGPNMNRPKQSKTVLIMDEVDGMSAGDRGGVADLIASIKISKFPIICICNDRYSQKLKSLVNYCLLLSYRKPTKQQMAKKFMEVAKAERLQVNEIALEELAERI 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03099 137 Coils Coil 120 137 - -
Vifa1g03099 137 Gene3D - 6 104 IPR027417 -
Vifa1g03099 137 PANTHER CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 21 136 - -
Vifa1g03099 137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 136 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03099 Vifa-Chr1 485527961 485528374 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03099 11 137 Core DNA Replication Machinery Family AT5G22010 77.953 7.77e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03099 K10754 - gmx:100790070 214.542