Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03070 ATGGTAGTGAAAGTGTATGGCCCTCACTGTGCCTCAACCAAACGGGTTCTAGTTTGTCTGATTGAGAAGGAAATAGAATTTGAGGTTGTCCCTGTTAATGTCTTAAACGATGAACACAAAGATCCTCAGTACCTCAAATTACAGCCTTTTGGAACTGTTCCTGTAATTCAAGATGGAGACTATACCCTTTATGAATCTCGGGCTATAATGAGATACTATGCAGAAAAATACAGATCTCAAGGAGTTGACTATCATCCACACGCATACAACTTGGCCATTCATGTTTTGTTTCCTGCACTAGCAGCTAGCAAGACTTCAGATCCTAAGGTAATTGAAGAGAGTGAAGCAAAGCTTGGGAAGGTGTTGGACATTTATGAAGAGAGGCTTTCAAATAGCAAGTATTTGGCTGGTGATTTTTTCAGTCTTGCTGATATAAGTCACCTTCCATTTACTGATTATATTGTTAACAATATGGGGAAAGAGTATTTGATTAAGGATAGGAAACATGTTACTGCTTGGTGGGATGATATAAGTAGTAGATCTTCCTGGAAGAAGGTTCTTGAGTTGTATAAATTTTCTTTTTAA 585 0.3795 MVVKVYGPHCASTKRVLVCLIEKEIEFEVVPVNVLNDEHKDPQYLKLQPFGTVPVIQDGDYTLYESRAIMRYYAEKYRSQGVDYHPHAYNLAIHVLFPALAASKTSDPKVIEESEAKLGKVLDIYEERLSNSKYLAGDFFSLADISHLPFTDYIVNNMGKEYLIKDRKHVTAWWDDISSRSSWKKVLELYKFSF 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03070 194 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 67 194 IPR010987 -
Vifa1g03070 194 CDD GST_N_Phi 2 76 - -
Vifa1g03070 194 Gene3D Glutaredoxin 3 76 - -
Vifa1g03070 194 Gene3D - 77 191 - -
Vifa1g03070 194 SUPERFAMILY Thioredoxin-like 6 81 IPR036249 -
Vifa1g03070 194 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 82 - -
Vifa1g03070 194 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Vifa1g03070 194 SFLD Main (cytGST) 4 180 - -
Vifa1g03070 194 Pfam Glutathione S-transferase, N-terminal domain 4 74 IPR004045 -
Vifa1g03070 194 FunFam Glutathione S-transferase F2 2 84 - -
Vifa1g03070 194 Pfam Glutathione S-transferase, C-terminal domain 91 180 IPR004046 -
Vifa1g03070 194 SUPERFAMILY GST C-terminal domain-like 91 192 IPR036282 -
Vifa1g03070 194 SFLD Glutathione Transferase (cytosolic) 4 180 IPR040079 -
Vifa1g03070 194 FunFam Glutathione S-transferase F2 64 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03070 Vifa-Chr1 480778875 480780233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03070 1 186 Glutathione S-transferase Gene Family AT2G30870 51.442 5.15e-74 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03070 K00799 - gmx:547951 302.367