Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03069 ATGAGATACTATGCAGAAAAATACAGATCTCAAGGAGTTGAGTTACTAGGAAAAACCATAGAAGAAAAAGGACTTATTGAACAATGGTTAGAAGTTGAAGCAAACAGCTATCATCCACACGCATACAACTTGGCCATTCATGTTTTGTTTCCTGCACTAGCAGCTAGCAAGACTTCAGATCCTAAGGTAATTGAAGAGAGTGAAGCAAAGCTTGGGAAGGTGTTGGACATTTATGAAGAGAGGCTTTCAAATAGCAAGTATTTGGCTGGTGATTTTTTCAGTCTTGCTGATATAAGTCACCTTCCATTTACTGATTATATTGTTAACAATATGGGGAAAGAGTATTTGATTAAGGATAGGAAACATGTTACTGCTTGGTGGGATGATATAAGTAGTAGATCTTCCTGGAAGAAGGTTCTTGAGTTGTATAAATTTTCTTTTTAA 444 0.3604 MRYYAEKYRSQGVELLGKTIEEKGLIEQWLEVEANSYHPHAYNLAIHVLFPALAASKTSDPKVIEESEAKLGKVLDIYEERLSNSKYLAGDFFSLADISHLPFTDYIVNNMGKEYLIKDRKHVTAWWDDISSRSSWKKVLELYKFSF 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03069 147 Gene3D - 17 140 - -
Vifa1g03069 147 FunFam Glutathione S-transferase F2 17 140 - -
Vifa1g03069 147 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 19 147 IPR010987 -
Vifa1g03069 147 Pfam Glutathione S-transferase, C-terminal domain 44 133 IPR004046 -
Vifa1g03069 147 SUPERFAMILY GST C-terminal domain-like 3 145 IPR036282 -
Vifa1g03069 147 CDD GST_C_Phi 21 140 IPR034347 -
Vifa1g03069 147 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03069 Vifa-Chr1 480765681 480766124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03069 1 139 Glutathione S-transferase Gene Family AT2G30870 63.309 1.17e-61 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03069 K00799 - gmx:547951 233.032