Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03024 ATGGTGGGCTCAGGAGCAACATTTGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAACCGTCTGTCTTAACTCTGACTGGACTTACTCTGTCTTCTGGACTATTCGTCCTCGCCCTAGAGTTAGAGGTGGTAATGGCTGTAAAGTTGGTGATGATAACGGTAGCTTGATGTTGATGTGGGAAGATGGATTTTGTAGAGGAAGAGGTTCATCATCAGGTTGTGTTGAAGATATTGATGGAGAAGATCTTGTTAGAAAAGCTTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTGGGTACTGGGTAGGCTGATGGGGAAAGTTGCATCTGATAAGTGTCACAAATGGGTTTTTAAAGAGCCAACAGAATGTGAACCAAACATCTCTAACTACTGGCAGAGTTCATTTGATGCTCTTCCTCCTGAATGGACAGACCAATTTGAGTCAGGCATTCAGACCATAGCTGTAATCCAAGCTGGCCATGGTCTTCTTCAACTTGGTTCTTGCAAGATTATTCCTGAGGATCTTCATTTTGTCCTAAGAATGAGGCACACATTTGAATCATTAGGCTACCAATCTGGTTTCTATCTCTCACAGCTTTTCTCATCAACAAGGAACACTTCCTCATCAACTTCACTTCCTTCAAAACCATCTTCCACCACCCTTCCAATTAGGCCACCTCCGCCACTCTTCAACTGGGGTCAGAGACCGCTATCTTCTCCTTCATCCATGCTATCTTCACCCAATTTTCAACAACATGCAGCTAGGCTTGGTTTTCCACAAACCAAAGATGAAACACACATGTTTCTCATGCCTCATGCATCATCGCATGATCAAACTCCAAGAATTGAAGACATGATGGGAGGAGGAGAACATCATGAAAATGACATTAAATGGCCAAATGGTTTGTCTTTCTTTAATGCTTTAACTGGTAGAGCTGACGATGCTAAGCTTTTGTTTAATCCAGAGAACTTAGGAGGAAAACAAAGTGATCATGATCATAATCATCATCAAAATCATCATCACCCTCTTAATCAAAATCCTAATTCAGATGGTTCAAACCCAAATGAGTTTTTGAGCTTGGATAGTCACCATGATGGTGGAAGGAAAATGGACAAATTTAAGAGAAGTTTCACTTTACCTACAAGAGTTGCTTCATCATCTTCATCTACCTCAATGGATCATCATCAACAACAAGGTGTGGAGTATAGGAATTCAGAAGGTGGCATGTACTCAGATGTTATGGAGACCTTTTTGGAGTGA 1290 0.4163 MVGSGATFDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRGSSSGCVEDIDGEDLVRKAFSKMSIQLYNYGEGWVLGRLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSSTTLPIRPPPPLFNWGQRPLSSPSSMLSSPNFQQHAARLGFPQTKDETHMFLMPHASSHDQTPRIEDMMGGGEHHENDIKWPNGLSFFNALTGRADDAKLLFNPENLGGKQSDHDHNHHQNHHHPLNQNPNSDGSNPNEFLSLDSHHDGGRKMDKFKRSFTLPTRVASSSSSTSMDHHQQQGVEYRNSEGGMYSDVMETFLE 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03024 429 PANTHER GB|AAF34833.1 1 429 IPR044170 -
Vifa1g03024 429 MobiDBLite consensus disorder prediction 329 412 - -
Vifa1g03024 429 MobiDBLite consensus disorder prediction 214 235 - -
Vifa1g03024 429 MobiDBLite consensus disorder prediction 214 228 - -
Vifa1g03024 429 MobiDBLite consensus disorder prediction 284 303 - -
Vifa1g03024 429 MobiDBLite consensus disorder prediction 371 386 - -
Vifa1g03024 429 MobiDBLite consensus disorder prediction 389 412 - -
Vifa1g03024 429 MobiDBLite consensus disorder prediction 287 303 - -
Vifa1g03024 429 MobiDBLite consensus disorder prediction 351 369 - -
Vifa1g03024 429 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 195 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03024 Vifa-Chr1 474231614 474233918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03024 21 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.250 1.11e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03024 - - psat:127086298 767.689